Structure of PDB 7abz Chain h Binding Site BS02

Receptor Information
>7abz Chain h (length=206) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKAS
VSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQI
NIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKV
EVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVW
IFKGEI
Ligand information
>7abz Chain 4 (length=363) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggggcugauucuggauucgacgggauuugcgaaacccaaggugcaugccg
aggggcgguuggccucguaaaaagccgcaaaaaauagucgcaaacgacga
aaacuacgcuuuagcagcuuaauaaccugcuuagagcccucucucccuag
ccuccgcucuuaggacggggaucaagagaggucaaacccaaaagagaucg
cguggaagcccugccugggguugaagcguuaaaacuuaaucaggcuaguu
uguuaguggcguguccguccgcagcuggcaagcgaauguaaagacugacu
aagcauguaguaccgaggauguaggaauuucggacgcggguucaacuccc
gccagcuccacca
<<<<<<<................<<<.<...........<<.........
.((..<<<<....))........>>>>.......................
......<.<<......................>>.>.....<...<<<..
<<<...((...>>>..>>>.......>.................))....
.............<<<.........................>>>......
<<...<...<<...(..(.>>....>..>>.............)..)...
............>>...........>>>.>.....<<<<.........>>
>>>>>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7abz Structures of tmRNA and SmpB as they transit through the ribosome.
Resolution3.21 Å
Binding residue
(original residue number in PDB)		R72 P73 G74 I77 K80 R132 K135 R136
Binding residue
(residue number reindexed from 1)		R71 P72 G73 I76 K79 R131 K134 R135
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7abz, PDBe:7abz, PDBj:7abz
PDBsum7abz
PubMed34389707
UniProtP0A7V3|RS3_ECOLI Small ribosomal subunit protein uS3 (Gene Name=rpsC)

[Back to BioLiP]