Structure of PDB 8jdl Chain AP Binding Site BS02
Receptor Information
>8jdl Chain AP (length=45) Species:
9606
(Homo sapiens) [
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RKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
8jdl Chain AP Residue 101 [
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Receptor-Ligand Complex Structure
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PDB
8jdl
Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Resolution
2.42 Å
Binding residue
(original residue number in PDB)
C21 C39
Binding residue
(residue number reindexed from 1)
C10 C28
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0008270
zinc ion binding
GO:0046872
metal ion binding
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005654
nucleoplasm
GO:0005737
cytoplasm
GO:0005783
endoplasmic reticulum
GO:0005791
rough endoplasmic reticulum
GO:0005829
cytosol
GO:0005840
ribosome
GO:0005925
focal adhesion
GO:0015935
small ribosomal subunit
GO:0022626
cytosolic ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:0070062
extracellular exosome
GO:0098556
cytoplasmic side of rough endoplasmic reticulum membrane
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8jdl
,
PDBe:8jdl
,
PDBj:8jdl
PDBsum
8jdl
PubMed
37992713
UniProt
P62273
|RS29_HUMAN Small ribosomal subunit protein uS14 (Gene Name=RPS29)
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