Structure of PDB 6o1t Chain A Binding Site BS02

Receptor Information
>6o1t Chain A (length=192) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLRKLKSGLERGLDTFDSTIEIIMQNLKTELESQETENFLEQLISRIFQV
VSRLTGVRIRNVQVPDITMEATSENSANVLIPITADVTVSLPFLGEIVDL
DLNVDLQTTVSIETDTEDPQVVVGECTNNPESISLTVLHSRFGLVNDVVD
IGVNLARRVVSSVVEGELCPRFRELLESLDAECVEKLIGESQ
Ligand information
Ligand IDOLA
InChIInChI=1S/C18H34O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h9-10H,2-8,11-17H2,1H3,(H,19,20)/b10-9-
InChIKeyZQPPMHVWECSIRJ-KTKRTIGZSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)CCCCCCC\C=C/CCCCCCCC
CACTVS 3.341CCCCCCCCC=CCCCCCCCC(O)=O
CACTVS 3.341CCCCCCCC\C=C/CCCCCCCC(O)=O
OpenEye OEToolkits 1.5.0CCCCCCCCC=CCCCCCCCC(=O)O
OpenEye OEToolkits 1.5.0CCCCCCCC\C=C/CCCCCCCC(=O)O
FormulaC18 H34 O2
NameOLEIC ACID
ChEMBLCHEMBL8659
DrugBank
ZINCZINC000006845860
PDB chain6o1t Chain A Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6o1t The three dimensional structure of Bovine Salivary Protein 30b (BSP30b) and its interaction with specific rumen bacteria.
Resolution2.3 Å
Binding residue
(original residue number in PDB)		L86 I113 I127 L214 F218
Binding residue
(residue number reindexed from 1)		L40 I67 I81 L168 F172
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0001530 lipopolysaccharide binding
GO:0008289 lipid binding
Cellular Component
GO:0005576 extracellular region
GO:0030141 secretory granule

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6o1t, PDBe:6o1t, PDBj:6o1t
PDBsum6o1t
PubMed30978191
UniProtP79125|SPL2B_BOVIN Short palate, lung and nasal epithelium carcinoma-associated protein 2B (Gene Name=SPLUNC2B)

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