Structure of PDB 1pfd Chain A Binding Site BS01

Receptor Information
>1pfd Chain A (length=96) Species: 4043 (Petroselinum crispum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATYNVKLITPDGEVEFKCDDDVYVLDQAEEEGIDIPYSCRAGSCSSCAGK
VVSGSIDQSDQSFLDDEQMDAGYVLTCHAYPTSDVVIETHKEEEIV
Ligand information
Ligand IDFES
InChIInChI=1S/2Fe.2S
InChIKeyNIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0		S1[Fe]S[Fe]1
FormulaFe2 S2
NameFE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain1pfd Chain A Residue 97 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1pfd The solution structure of parsley [2Fe-2S]ferredoxin.
ResolutionN/A
Binding residue
(original residue number in PDB)		S38 C39 G42 C44 C47 C77
Binding residue
(residue number reindexed from 1)		S38 C39 G42 C44 C47 C77
Annotation score3
Enzymatic activity
Enzyme Commision number 1.7.7.2: ferredoxin--nitrate reductase.
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0006124 ferredoxin metabolic process
GO:0022900 electron transport chain
Cellular Component
GO:0009507 chloroplast

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1pfd, PDBe:1pfd, PDBj:1pfd
PDBsum1pfd
PubMed9874213
UniProtQ7M1S1

[Back to BioLiP]