Structure of PDB 1dze Chain A Binding Site BS01
Receptor Information
>1dze Chain A (length=225) Species:
2242
(Halobacterium salinarum) [
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GRPEWIWLALGTALMGLGTLYFLVKGMGVSDPDAKKFYAITTLVPAIAFT
MYLSMLLGYGLTMVPFGGEQNPIYWARYADWLFTTPLLLLDLALLVDADQ
GTILALVGADGIMIGTGLVGALTKVYSYRFVWWAISTAAMLYILYVLFFG
FTSKAESMRPEVASTFKVLRNVTVVLWSAYPVVWLIGSEGAGIVPLNIET
LLFMVLDVSAKVGFGLILLRSRAIF
Ligand information
Ligand ID
GLC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKey
WQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0
C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341
OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
alpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL423707
DrugBank
ZINC
ZINC000003861213
PDB chain
1dze Chain B Residue 1 [
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Receptor-Ligand Complex Structure
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PDB
1dze
Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
T67 L127
Binding residue
(residue number reindexed from 1)
T62 L122
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005216
monoatomic ion channel activity
GO:0009881
photoreceptor activity
GO:0015454
light-driven active monoatomic ion transmembrane transporter activity
Biological Process
GO:0006811
monoatomic ion transport
GO:0007602
phototransduction
GO:1902600
proton transmembrane transport
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1dze
,
PDBe:1dze
,
PDBj:1dze
PDBsum
1dze
PubMed
15328615
UniProt
P02945
|BACR_HALSA Bacteriorhodopsin (Gene Name=bop)
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