Zhanglab forum

Is there any way to compile MMalign or USalign source code into a windows executable? This is possible for TMalign, but in USalign and MMalign there are headers that do not exist in Windows and thus the compiling fails.

Example:
#include <sys/wait.h> // for waitpid()
#include <sys/ioctl.h> // for ioctl() and FIONREAD

It seems to be solved. For reference, I used the source code from (https://github.com/pylelab/USalign/) with a different version and setup of MinGW (gcc version 9.2.0) and they both compiled successfully.

There is actually precompiled binary at the bottom of https://zhanggroup.org/US-align/