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BioLiP Has Fewer Entries Than Before
Posted: Tue Oct 24, 2023 5:35 am
by gcyoung
I noticed that the BioLiP database has 420307 ligand entries now, as compared to 454406 on July 20 (
https://web.archive.org/web/20230720112 ... /index.cgi). Were some entries removed?
Re: BioLiP Has Fewer Entries Than Before
Posted: Wed Oct 25, 2023 8:51 am
by zcx@umich.edu
Yes, some entries are removed due to correction of van deer Waals radius calculation.
https://github.com/kad-ecoli/mmCIF2BioL ... d9349c02c9
Re: BioLiP Has Fewer Entries Than Before
Posted: Wed Oct 25, 2023 10:58 pm
by gcyoung
Ok, good to know.