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Speed up DeepFold by multiple cpu usage?

https://zhanglab.comp.nus.edu.sg/forum/viewtopic.php?t=708

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Speed up DeepFold by multiple cpu usage?

Posted: Thu Jan 19, 2023 12:45 pm
by SLarmadillo
Dear Zhang Lab team,

I have seen optional CPU numbers in several scripts in DeepFold. Will it speed up the prediction time if I modify the CPU numbers in each script individually?

best

Re: Speed up DeepFold by multiple cpu usage?

Posted: Sat Jan 21, 2023 2:31 am
by robpearc
It will speed up the MSA generation time mainly, which is usually the slowest step during modeling.
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