Query regarding interaction analysis
Posted: Sat Oct 15, 2022 5:06 am
How can I predict interaction of my predicted protein with other proteins (possible binding) on i-Tasser ?
Dear user,
If you know the second protein that you want to check if it will bind to your target sequence,
you can try any of the following
https://zhanggroup.org/spring/
https://zhanggroup.org/COTH/
https://zhanggroup.org/Threpp/
https://zhanggroup.org/PEPPI/
if you do not know the potentially second sequence, you may try STRING database
https://string-db.org/
Best
IT team