errors in the deepmsa code

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yuieroqreqw
Posts: 4
Joined: Mon May 10, 2021 9:28 am

errors in the deepmsa code

Post by yuieroqreqw »

The parameter s in line 50 of kclust2db.py script in the software code of deepmsa you provided is not used, so ask if this is an error
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xiaogenz
Posts: 153
Joined: Sun Apr 25, 2021 12:02 am

Re: errors in the deepmsa code

Post by xiaogenz »

This is not an error. s is a default parameter as we only use the the sequence identity (seqID) cutoff of 30%. s=1.12 equals to the seqID = 30%.
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yuieroqreqw
Posts: 4
Joined: Mon May 10, 2021 9:28 am

Re: errors in the deepmsa code

Post by yuieroqreqw »

ok, Thanks!
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