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IonCom - Missing Probabilities for Predicted Binding Sites

Posted: Sat Aug 31, 2024 4:08 am
by saakdr@missouri.edu
Hello,

Could you please let me know how to retrieve the predicted probabilities for the residues of the input sequence?
Here is the link to my job:
https://seq2fun.dcmb.med.umich.edu//Ion ... put/12883/

And here is the link to the example output shared on the IonCom tool website, which includes probabilities and other details:
https://zhanggroup.org/IonCom/example/

However, when I run the IonCom tool, I only get binding and non-binding sites.

Best regards,
Saladin Alqarghuli
PhD Candidate
University of Missouri
Electrical Engineering and Computer Science Department

Re: IonCom - Missing Probabilities for Predicted Binding Sites

Posted: Mon Sep 02, 2024 1:57 am
by XiZhang
Dear user,

Thank you for using our server. You can find the probabilities for predicted binding sites through https://seq2fun.dcmb.med.umich.edu//Ion ... rob_zn.txt

Best,
Xi