To whom it may concern,
I have read: viewtopic.php?f=3&t=652&p=1220&hilit=pl ... fe7c#p1220
Does US-Align take into account pLDDT and BAT scores for AlphaFold and PDB crystal structures? Both are residue location confidence metrics. I believe this could enhance the tool and be implemented using the summation of relative weights of the aligned residues.
Best wishes,
Antonia
Alignment based on pLDDT
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zcx@umich.edu
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Re: Alignment based on pLDDT
No, US-align cannot consider pLDDT score.