How can I input multi-chain sequence as fasta?

[jayjayel]

Hi,

I've tried to input multi-chain sequence as below.

========================================
>A
EVQLVESGGGLVQPGGSLRLSCAASGFNIHSSSIHWVRQAPGKGLEWVAATYSSFGSITYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYHHPFGYALDYWGQGTLVTVSSGGGGSGGGGSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGVYLFTFGQGTKVEIKRTV
>B
SKAPVCQEITVPMCRGIGYNLTHMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGRDAEVLCMDY
=========================================

However, it didn't work.

How can I predict multi-chain model by D-I-TASSER?

Thank you.

JL

[jlspzw]

Dear user,

D-I-TASSER currently does not support multi-chain modeling. We are working on a new server and will let it be released soon.

You can try this link temporarily, but the waiting time may be slightly longer since we are not complete it yet.

https://zhanggroup.org/DeepMSAFold/

Best
IT Team

[donglg13]

Hi Zhanglab,

Thank you for the server. May I ask whether the stand-alone DeepMSAFold-multimer be available in the nearby feature?

Best,
Liguo

[jlspzw]

Dear user,

We are working on it, and the package will be available after our manuscript has been published.

Best
IT Team

[donglg13]

Hi,

Is the DeepMSAfold-multimer server available now?

Liguo

[jlspzw]

This server will be available after the paper is published.
If you have targets (should not be too much), you can paste them here, and we can manually do them for you.