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Unable to download databases for DeepMSA2

Last post by junh « Sun May 25, 2025 10:03 am
Replies: 4
by dimi » Fri May 16, 2025 8:48 pm

4 Replies

389635 Views

Last post by junh
Sun May 25, 2025 10:03 am
COACH job still running after 1 month

Last post by ITASSERteam « Thu May 22, 2025 1:47 pm
Replies: 2
by chuatx » Wed May 29, 2024 2:12 pm

2 Replies

466553 Views

Last post by ITASSERteam
Thu May 22, 2025 1:47 pm
I have question.

Last post by Vennpaul « Tue Dec 03, 2024 12:29 pm
Replies: 2
by Butertench1975 » Wed Nov 06, 2024 2:44 pm

2 Replies

361921 Views

Last post by Vennpaul
Tue Dec 03, 2024 12:29 pm
Some files may missing in CR-I-TASSER

Last post by responsivecats « Tue Dec 03, 2024 10:43 am
Replies: 2
by cooper » Tue Apr 19, 2022 10:16 am

2 Replies

201913 Views

Last post by responsivecats
Tue Dec 03, 2024 10:43 am
Help with CRISPR Base Editing Efficiency in Cell Cultures

Last post by pigkang « Mon Dec 02, 2024 3:38 pm
Replies: 2
by JacquelineJCastle » Sat Nov 16, 2024 9:47 am

2 Replies

93096 Views

Last post by pigkang
Mon Dec 02, 2024 3:38 pm
DeepMSA error from CR-I-TASSER

Last post by saucesavings « Tue Nov 26, 2024 1:05 pm
Replies: 4
by ning » Sat Mar 04, 2023 11:17 pm

4 Replies

262850 Views

Last post by saucesavings
Tue Nov 26, 2024 1:05 pm
DMFold, DeepMSA2 and I-TASSER-based methods updates

Last post by TomSimth « Mon Nov 18, 2024 5:38 pm
Replies: 3
by jlspzw » Sun Feb 11, 2024 5:18 am

3 Replies

224179 Views

Last post by TomSimth
Mon Nov 18, 2024 5:38 pm
Take into account pLDDT into TM-score

Last post by throughyuletide « Fri Nov 15, 2024 10:33 am
Replies: 3
by mariaartlle » Fri Dec 09, 2022 7:13 pm

3 Replies

235684 Views

Last post by throughyuletide
Fri Nov 15, 2024 10:33 am
Information regarding restraint files generated and used by I-TASSER standalone program

Last post by illnessused « Mon Nov 04, 2024 9:42 am
Replies: 4
by rupesh » Wed Aug 31, 2022 5:53 pm

4 Replies

275970 Views

Last post by illnessused
Mon Nov 04, 2024 9:42 am
probelm in demo2

Last post by phisola25 « Sat Oct 26, 2024 1:16 am
Replies: 3
by ladimafakher » Sat Aug 26, 2023 8:33 pm

3 Replies

232565 Views

Last post by phisola25
Sat Oct 26, 2024 1:16 am
error when running i-tasser

Last post by emmausa « Tue Oct 22, 2024 9:48 am
Replies: 7
by fatin_izz » Wed Jul 07, 2021 4:38 am

7 Replies

1498442 Views

Last post by emmausa
Tue Oct 22, 2024 9:48 am
java.lang.NumberFormatException: For input string: -NAN

Last post by sarausa « Tue Oct 22, 2024 9:46 am
Replies: 9
by afif » Sat Feb 10, 2024 4:32 am

9 Replies

352375 Views

Last post by sarausa
Tue Oct 22, 2024 9:46 am
BioLip data

Last post by zcx@umich.edu « Wed Oct 09, 2024 9:59 am
Replies: 1
by asnascimento » Wed Sep 18, 2024 3:33 am

1 Replies

377383 Views

Last post by zcx@umich.edu
Wed Oct 09, 2024 9:59 am
[3D structure require] The new protein no information of domain available

Last post by markangelo « Tue Oct 08, 2024 9:49 am
Replies: 7
by KOUKAB IMRAN » Mon May 31, 2021 1:09 pm

7 Replies

318208 Views

Last post by markangelo
Tue Oct 08, 2024 9:49 am
is there a version of the software that can read cryo-EM density maps and mmcif input files?

Last post by ITASSERteam « Sat Sep 14, 2024 10:23 am
Replies: 3
by zbiao » Fri Jul 12, 2024 3:50 pm

3 Replies

215411 Views

Last post by ITASSERteam
Sat Sep 14, 2024 10:23 am
cpxDeepMSA

Last post by irlpilchard « Mon Sep 09, 2024 12:56 pm
Replies: 1
by JakobReber » Thu Aug 29, 2024 8:37 pm

1 Replies

24874 Views

Last post by irlpilchard
Mon Sep 09, 2024 12:56 pm
IonCom - Missing Probabilities for Predicted Binding Sites

Last post by XiZhang « Mon Sep 02, 2024 9:57 am
Replies: 1
by saakdr@missouri.edu » Sat Aug 31, 2024 12:08 pm

1 Replies

71766 Views

Last post by XiZhang
Mon Sep 02, 2024 9:57 am
Quark/C-quark/c-i-tasser job has been running for a month

Last post by XiZhang « Fri Aug 30, 2024 11:22 am
Replies: 2
by rafail01 » Sat Jul 13, 2024 3:00 pm

2 Replies

81536 Views

Last post by XiZhang
Fri Aug 30, 2024 11:22 am
I want to cancel/delete my job

Last post by XiZhang « Tue Aug 27, 2024 4:36 pm
Replies: 1
by neginbagherisums » Sat Jul 27, 2024 3:19 am

1 Replies

76820 Views

Last post by XiZhang
Tue Aug 27, 2024 4:36 pm
known working platforms for I-TASSER 5.2 standalone?

Last post by hymnsham « Thu Aug 01, 2024 2:56 pm
Replies: 1
by afif » Tue Jul 30, 2024 1:41 pm

1 Replies

35295 Views

Last post by hymnsham
Thu Aug 01, 2024 2:56 pm
US-align vs TM-align for antibody alignment

Last post by zcx@umich.edu « Sat Jul 27, 2024 7:53 pm
Replies: 1
by scriblerus » Thu Jul 25, 2024 12:33 am

1 Replies

320227 Views

Last post by zcx@umich.edu
Sat Jul 27, 2024 7:53 pm
EDTSurf: hydration shell between SAS and SES

Last post by zbiao « Fri Jul 12, 2024 3:41 pm
Replies: 1
by johnnytam100 » Wed Jul 10, 2024 9:50 am

1 Replies

82393 Views

Last post by zbiao
Fri Jul 12, 2024 3:41 pm
Inquiry of PEPPI results

Last post by xiz052 « Thu Jul 11, 2024 6:15 am

by xiz052 » Thu Jul 11, 2024 6:15 am

0 Replies

273878 Views

Last post by xiz052
Thu Jul 11, 2024 6:15 am
Unable to submit jobs in C-QUARK

Last post by Anu1 « Wed Jul 10, 2024 11:12 pm
Replies: 2
by Anu1 » Mon Jul 08, 2024 6:11 pm

2 Replies

76363 Views

Last post by Anu1
Wed Jul 10, 2024 11:12 pm
How to compare multiple protein structures with TM-align

Last post by zcx@umich.edu « Wed Jul 10, 2024 2:49 am
Replies: 1
by xubai » Mon Jul 08, 2024 4:32 pm

1 Replies

319151 Views

Last post by zcx@umich.edu
Wed Jul 10, 2024 2:49 am
STRUM-ITASSER error code local run

Last post by XiZhang « Fri Jun 28, 2024 12:08 pm
Replies: 1
by linfo » Mon May 06, 2024 1:43 pm

1 Replies

75613 Views

Last post by XiZhang
Fri Jun 28, 2024 12:08 pm
USalign RMSD

Last post by zcx@umich.edu « Thu Jun 27, 2024 7:17 pm
Replies: 1
by fsin » Mon Jun 10, 2024 11:34 am

1 Replies

319285 Views

Last post by zcx@umich.edu
Thu Jun 27, 2024 7:17 pm
Unreadable protein pdb file

Last post by hujun « Thu Jun 27, 2024 9:27 am
Replies: 1
by Sanskritishrivastava » Sat Jun 22, 2024 1:28 pm

1 Replies

88726 Views

Last post by hujun
Thu Jun 27, 2024 9:27 am
Polysaccharide/Peptides

Last post by sophiamartin2342 « Fri Jun 21, 2024 10:41 am
Replies: 2
by Sami » Thu Oct 07, 2021 2:39 am

2 Replies

39506 Views

Last post by sophiamartin2342
Fri Jun 21, 2024 10:41 am
How to add latest structure file to database when useing DMFold

Last post by DSJ « Mon Jun 03, 2024 5:36 pm

by DSJ » Mon Jun 03, 2024 5:36 pm

0 Replies

358242 Views

Last post by DSJ
Mon Jun 03, 2024 5:36 pm
DMFold

Last post by wangzhibo321 « Wed May 08, 2024 12:35 pm
Replies: 2
by wangzhibo321 » Sun May 05, 2024 1:33 pm

2 Replies

658894 Views

Last post by wangzhibo321
Wed May 08, 2024 12:35 pm
Restricting TM-align to a given superposition

Last post by kamurani « Mon May 06, 2024 12:08 pm
Replies: 4
by kamurani » Wed Apr 03, 2024 9:29 am

4 Replies

633598 Views

Last post by kamurani
Mon May 06, 2024 12:08 pm
ultiple PDB templates

Last post by XiZhang « Sat May 04, 2024 10:25 am
Replies: 1
by 238527177@fzu.edu.cn » Thu Apr 18, 2024 11:14 am

1 Replies

115193 Views

Last post by XiZhang
Sat May 04, 2024 10:25 am
Need help for running complex

Last post by jlspzw « Sat May 04, 2024 4:29 am
Replies: 3
by ljt20242024 » Thu Apr 25, 2024 9:32 pm

3 Replies

971188 Views

Last post by jlspzw
Sat May 04, 2024 4:29 am
Biolip: pocket - chain relationship

Last post by yaron « Fri May 03, 2024 1:41 pm
Replies: 2
by yaron » Sun Mar 03, 2024 7:54 pm

2 Replies

392438 Views

Last post by yaron
Fri May 03, 2024 1:41 pm
CR-I-Tasser

Last post by XiZhang « Fri May 03, 2024 11:14 am
Replies: 1
by mforoozm » Sun Apr 07, 2024 1:30 pm

1 Replies

144934 Views

Last post by XiZhang
Fri May 03, 2024 11:14 am
Alignment based on pLDDT

Last post by zcx@umich.edu « Fri May 03, 2024 3:11 am
Replies: 1
by antonia.feilden » Tue Mar 19, 2024 12:56 am

1 Replies

453490 Views

Last post by zcx@umich.edu
Fri May 03, 2024 3:11 am
DMFold

Last post by jlspzw « Tue Apr 30, 2024 2:03 pm
Replies: 1
by edithfore » Mon Apr 29, 2024 10:45 pm

1 Replies

629826 Views

Last post by jlspzw
Tue Apr 30, 2024 2:03 pm
EDTSurf:EDTSurf program is not generating the XX.dep output files as expected

Last post by zbiao « Tue Apr 30, 2024 1:59 pm
Replies: 3
by zbiao » Sun Apr 28, 2024 7:32 pm

3 Replies

247917 Views

Last post by zbiao
Tue Apr 30, 2024 1:59 pm
Homologous dimer modeling

Last post by 238527177@fzu.edu.cn « Thu Apr 18, 2024 8:52 am
Replies: 2
by 238527177@fzu.edu.cn » Wed Apr 17, 2024 8:36 pm

2 Replies

666427 Views

Last post by 238527177@fzu.edu.cn
Thu Apr 18, 2024 8:52 am

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