******************************************************************** * US-align (Version 20211003) * * Universal Structure Alignment of Proteins and Nucleic Acids * * References: C Zhang, M Shine, AM Pyle, Y Zhang. (2022) Submitted.* * Please email comments and suggestions to yangzhanglab@umich.edu * ******************************************************************** Name of Structure_1: US986070934A.pdb:X (to be superimposed onto Structure_2) Name of Structure_2: US986070934B.pdb:X Length of Structure_1: 71 residues Length of Structure_2: 67 residues Aligned length= 67, RMSD= 1.20, Seq_ID=n_identical/n_aligned= 0.612 TM-score= 0.81266 (normalized by length of Structure_1: L=71, d0=2.54) TM-score= 0.84976 (normalized by length of Structure_2: L=67, d0=2.39) (You should use TM-score normalized by length of the reference structure) (":" denotes residue pairs of d < 5.0 Angstrom, "." denotes other aligned residues) cgcuucauauaauccuaaugauaugguuugggaguuucuaccaagagccuuaaacucuugauuaugaagug ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. --gaucauauaaucgcguggauauggcacgcaaguuucuaccgggcaccguaaauguccgacuaugguc-- #Total CPU time is 0.01 seconds
(water of Structure_1 and Structure_2 in blue and red, respectively; non-water ligand of Structure_1 and Structure_2 in cyan and pink, respectively). |