Contact Prediction for target T1009

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>T1009 (718 residues) [download]
TYFAPNSTGLRIQHGFETILIQPFGYDGFRVRAWPFRPPSGNEISFIYDPPIEGYEDTAH
GMSYDTATTGTEPRTLRNGNIILRTTGWGGTTAGYRLSFYRVNDDGSETLLTNEYAPLKS
LNPRYYYWPGPGAEFSAEFSFSATPDEQIYGTGTQQDHMINKKGSVIDMVNFNSYIPTPV
FMSNKGYAFIWNMPAEGRMEFGTLRTRFTAASTTLVDYVIVAAQPGDYDTLQQRISALTG
RAPAPPDFSLGYIQSKLRYENQTEVELLAQNFHDRNIPVSMIVIDYQSWAHQGDWALDPR
LWPNVAQMSARVKNLTGAEMMASLWPSVADDSVNYAALQANGLLSATRDGPGTTDSWNGS
YIRNYDSTNPSARKFLWSMLKKNYYDKGIKNFWIDQADGGALGEAYENNGQSTYIESIPF
TLPNVNYAAGTQLSVGKLYPWAHQQAIEEGFRNATDTKEGSACDHVSLSRSGYIGSQRFC
SMIWSGDTTSVWDTLAVQVASGLSAAATGWGWWTVDAGGFEVDSTVWWSGNIDTPEYREL
YVRWLAWTTFLPFMRTHGSRTCYFQDAYTCANEPWSYGASNTPIIVSYIHLRYQLGAYLK
SIFNQFHLTGRSIMRPLYMDFEKTDPKISQLVSSNSNYTTQQYMFGPRLLVSPVTLPNVT
EWPVYLPQTGQNNTKPWTYWWTNETYAGGQVVKVPAPLQHIPVFHLGSREELLSGNVF

ResTriplet Contact Prediction

Contact map: respre.NNB.gz (final), respre.NNB.ful.gz (initial), ResTriplet_AT.NNB.gz (human).

Secondary structure: tmpseq.aln.ss2.

MSA for full sequence: seq.hhbaln.gz (stage 1), seq.jacaln.gz (stage 2), seq.aln.gz (final).

TripletRes Contact Prediction

Contact map: TripletRes.NNB.gz (final), TripletRes.NNB.ful.gz (initial), TripletRes_AT.NNB.gz (human).

Domain partition: TripletRes.NNB.lydom.

Zhang_Contact Prediction

Contact map: Zhang_Contact.NNB.gz (final), bayes.dat.gz (Naive Bayes), respre.dat.gz (best component predictor).