Contact Prediction for target T1005

User Input

>T1005 (364 residues) [download]
MKLLKYLCIGISALSILSCSDWTSEEREVFENQEGMHRLIPLIEAQTEEDLTPTMREYFA
QIREYRKTPHVKGFGWFGNWTGKGNNAQNYLKMLPDSVDFVSLWGTRGYLSDEQKADLKF
FQEVKGGKALLCWIIQDLGDQLTPKGLNATQYWVEEKGQGNFIEGVKAYANAICDSIEKY
NLDGFDIDYEPGYGHSGTLANYQTISPSGNNKMQVFIETLSARLRPAGRMLVMDGQPDLL
STETSKLVDHYIYQAYWESSTSSVIYKINKPNLDDWERKTIITVEFEQGWKTGGITYYTS
VRPELNSMEGNQILDYATLDLPSGKRIGGIGTYHMEYDYPNDPPYKWLRKALYFGNQVYP
GKFD

ResTriplet Contact Prediction

Contact map: respre.NNB.gz (final), respre.NNB.ful.gz (initial), ResTriplet_AT.NNB.gz (human).

Secondary structure: tmpseq.aln.ss2.

MSA for full sequence: seq.hhbaln.gz (stage 1), seq.jacaln.gz (stage 2), seq.aln.gz (final).

TripletRes Contact Prediction

Contact map: TripletRes.NNB.gz (final), TripletRes.NNB.ful.gz (initial), TripletRes_AT.NNB.gz (human).

Domain partition: TripletRes.NNB.lydom.

Zhang_Contact Prediction

Contact map: Zhang_Contact.NNB.gz (final), bayes.dat.gz (Naive Bayes), respre.dat.gz (best component predictor).