Template-based Modeling Results for YQEC_ECOLI

Submitted Primary Sequence

>Length 256
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
CCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
5532223121002002233310000001101100011002102322320000010312222222200002222011111222310000001333323131012300200032230000001011031220301333111014101000000002002140223101112100301312232202220001002012101330342011000012022231021012002102433020000010334311111126
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKSIVDPSALVIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQASGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFTPEAIDALVQRPECDVILIEADGSRGMPLKAPDEHEPCIPKSSCCVIAVMGGHTLGAKVSTENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQCENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN
1	MUSTER	1w78A1	0.212	0.812	0.736	threading_1	IDLGLERVSLVAARLGKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPESAHTASFAE------IESARGDISLTYFEYGTLSALWLFKQLDVVILEV-G-------------------------------LGGRLDATNIVDA-DVAVVTSIALDHTWLGPDRESIGR-EAGIFR--SEK---PAIVGEPEPSTIADVAQEKGALLQRRGVEWNYSV---TDHDWAFSDAH
2	SPARKS	2qm7a	0.142	0.906	1.178	threading_2	AESRRADHAAVRDLIDAGRAIRVGITGGVGKSTTIDALGSLLTAAGHKVAVLA----VDPSSTRT---------RMARLAIDRN--AFIRPSPSSGTLGGVAAKTRETMLLCEGFDVILVETVGV--------GQSETAVADLTDFFLVLPGAGDELQGIKKGIFELADMIA-VNKADDGDGERASAAASEYRAALHILTPPSATWTPPVVLHGKGLDSLWSRIEDHRSKLTATGVHERLHQRLVGSAEVRQATAE
3	PROSPECT2	1jbwa2	0.138	0.906	1.302	threading_3	MLAKTGDHRRILTLLHAQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPDAALVNAVAFVRAALERLQQQQAD--FNVTEFEFITALRQRQVDVAVIEVG---------IGGDTDSTNVITPVVSVLTE---VALDHQKLLGHTITAIAKHAGIIKRGIPLVPDAAAVVAAKVATTGSQQDGRISDLEVPLVGDQRNMAIAIQTAKVYAKQT----------EWPLTPQNISH
4	PPA-I	1np6B	0.176	0.598	1.048	threading_4	------------------MIPLLAFAAGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPG---KDSYELRKAGAVASQQRWALMTETPDEEE---LDLQFLASRMDTSKLDLILVEGFKHEEIAFRDGAGHRPEELVIDRHVIAVASDVPLNLDVDVEGL--ADFVVEWMQKQN-----------------------------------------------------------------------------
5	HHPRED-l	2j37_W	0.147	0.902	2.454	threading_5	LVKLVDPGVKAWTP-TKG--NVIMFVGGSGKTTTCSKLAYYYQRKGWKTCLIC-ADTFRAGA---------FDQLKQNATKARIPFYGSYTEM---DPVIIASEGVEKFK-NENFEIIIVDTSGRHKQEDSLFEEMQVANAIQPDNIVYVMDA-SIGQ----ACEAQAKAFKDKVDVA-SVIVTKLDGHASPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTRDMYEQIMKMGPFSQILG-
6	HHPRED-g	1rj9_A	0.167	0.793	2.133	threading_6	LVGMLEPDEATLRKLVEPKGRVVLVVGGVGKTTTIAKLGRYYQNLGKKVMF-------------CAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQAMK-ARGYDLLFV--DTAGRLHTKHNLMEELADPEEPKEVWLVLDAVT-GQNGLEQA----KKFHEAVG------LTGVIVTKLDGTAKGGVLKVP--IKFVGVGEGPDDLQPFD-PEAFVEALLE-----------------------
7	SP3	2qm7a	0.171	0.914	1.216	threading_7	AESRRDHRAAVRDLIDAGRAIRVGITGGVGKSTTIDALGSLLTAAGHKVAVLA----VDPSSTRT---------RMARLAIDRN--AFIRPSPSSGTLGGVAAKTRETMLLCEGFDVILVETVGV------GQSETAVADLTDFFLVLMLPGAGDELQGIKKGIFELADMIA-VNKADGDGERRASAAASEYRAALHILTPPSATWTPVVTISGLATGEIAGKRREQDVKWMWALVHERLHQRLVGSAEVRQATAE
8	SAM-T99	2og2A2	0.228	0.496	1.148	threading_8	---------KTELQLGFRKPAVIMIVGGGGKTTSLGKLAHRLKNEGTKVLM---------AAGDTFRAAASDQLEIWAERTGCEIVVAEGDKA---KAATVLSKAVKRGK-EEGYDVVLC-------------------------------------------------------DTSGRLHTNYSLMEELIACKKAVGKIVSG----------------------------------------------------
9	MUSTER	2wooA	0.169	0.902	0.705	threading_9	------PGT-LENLLEQTSLKWIFVGGKGGKTTTSCSLAIQMSKVRSSVLLISTTKFGKDARKVPAMEIDPNLSIQEMTEQALSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDT---------APTGHTLRFLNFPTVL---KALGKL-GGLSSRFGPMINQMGSIMGQDLFG--KMESMRANISEVNKQFKN-PDLTTFVCVCI--SEFLSLYETERMIQELTSYEIDNIVVNQLLDPNTTCPQCMA
10	SPARKS	3nxsa	0.155	0.883	1.113	threading_10	VESTRDHREQAQQLLLDGSAMHVGITGGVGKSTTIEALGMHLIEAGHRVAVLAVDRM-------------------ARLAVHPD--AYIRPSPTSGTLGGVATRETIVLLEAAGYDVILVETVGVGQ--------SEVTVAGMVDTFVFLT-LARTGDQLQGIKKGVLELADVIVKADGEHAVEAKAAARELSGAIRLIYPRESLWRPVLTMSAVEGPELWETVLRHREVLEEAGVRDAVLDRVMNHPEVRRIRVR

Predicted Tertiary Structure


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TM-score=0.691 to 2gcaA SCOP code=c.59.1.2	TM-score=0.694 to 2gcaA SCOP code=c.59.1.2	TM-score=0.700 to 2qm8A SCOP code=c.37.1.10	TM-score=0.709 to 2gcaA SCOP code=c.59.1.2	TM-score=0.655 to 1np6B SCOP code=c.37.1.10