Template-based Modeling Results for YJIN_ECOLI

Submitted Primary Sequence

>Length 426
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
543212122112001000000000000010022100000010000000000000000000002402120103111002321320032002002320021310111033121011002101223103200210020011003212322023002300220034131120012002101423322200110021013103333113100210121022112110310012100220021002002200221242321301200120022003303313301210210121133232013002300220131022113232230122013002200310221320121011002200220022002101200120042122310021012211320100101000000000000000010011021243
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKLIELRRAKRLALSLLLIAAATFVVTLFLPPNFWVSGVKAIAEAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSLVALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAIDKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEHPLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDPEMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKVDINSEDSRVKERIARAGQWFGETLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKDLQFIRVNGTLVGGCIGLILYLLSQLPALFPLGNF
1	PROSPECT2	1b3ua	0.108	0.995	2.154	threading_1	AARLNSIKKLSTIALALRTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSVKAELRQYFRNLCSDDT--PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDEPEVRLNIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSNVAKSLQKIGPILDLSLA
2	PPA-I	1b3uA	0.108	0.995	1.062	threading_2	IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYSLATVEERDKAVESLRAISHE--HSPSDLEAHFVPDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVATELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA
3	HHPRED-g	2qk2_A	0.139	0.472	1.056	threading_3	----------------------------------------------------------------------------------------------------------------------------------------GSH-DLLDPVDILSK-PKDFYDKLEEKKWTLRSLEVLEKLLTDGEYGAL----VSALKKVITDSNLVA-AGKCLALLAKGLAKRFS--------------NYASACVPSLLEKFKEKKPNVVTALREAIDAIYESLSNNPSVKSETALFIARALTRTQPTALNKKLLKLLTTSLVKTLNEPDPTVRDSSAEALGTLIKL-GDDPLK-AKIKECQEKA-------------------------------------------EIKIKVA-----------------------
4	PROSPECT2	1jdha	0.083	0.988	2.012	threading_4	IRAIPELTKLNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQAGTLHNLSHHREGLLAIFKS--GGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN--VKFLAITTDCLQILAYGNQESKLIILGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGMQALPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGINVVTCAAGILSNLTCNNYKNKMMVCQEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRL-HYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLRERLVQLLVRAHQDMEEIVEGCTGALHILARDVHNRIVIRGLIPLFVQLLYSPIENIQRVAAGVLCELKEAAEAIEAEGA
5	PROSPECT2	1ejlI	0.107	0.918	1.959	threading_5	GTVNWSVEDIVKGLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG------------------------KTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPH--AHISEQAVWALGNIA-GDGSAFRDLVIKDPLLALLAVPDLSTLACGYLRNLTWPAPPLDAVEQILPTLVRLLHHNEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLD----KIEALQRHENESVYKASLNLIEKYFS----
6	PROSPECT2	1ee4a	0.094	0.923	1.954	threading_6	QELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAG------------VVPRLVEFMR-----------ENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGS--VEVKEQAIWALGNVA-GDSTDYRDYVLQCNAMEPILNSNKPSLIRTATWTLSNPQPDWSVVSQALPTLAKLIYSMETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVETLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDNLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSPLCDLLEIADNRIIEVTLDALENILKM--GEADKEARGLNINENADFIEKAG-GMEKIFNCIYEKAYKIIETY----F
7	PROSPECT2	1w63A	0.107	0.991	1.881	threading_7	MPQAEEREMIQKECAAIRRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTQFVQGLALCTLGCMGSSEMCRDGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYDPFLQVRILRLLRILGRNDDSSEAMNDILAQVATNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSGIFLAAEKYAPSKRWHIDTIVPNLIQLITNSVEMHAYTVQRLYKAILGPLVQVAAWCIGEYGDLLVSGQEDEVLDILESVLISNMS----TSVTRGYALTAIMKLSVEYNALFKKYDH
8	MUSTER	1b3uA	0.115	0.977	0.963	threading_8	QLRLNSIKKLSTIALALGVERTRSELLPFLTEDEVLLALAEQLGTFTLVGGPEYVHCLLPPLESL---ATVEETVV----RDKAVESLRAISHE--HSPSDLEAHFVPLAVKAELRQYFRNLCSTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKRVRYMVADKFTELQKAVGPEITKTDVKEFCENCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDEDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMT-NVLSEVCGQDITTKHMLPTVLRMAGD
9	SPARKS	2xwub	0.101	0.951	0.869	threading_9	LDTVENVEKALHQLYIENKNLAQKWLMQAQVSPQAWHFSWQKVPEIQYFGASALHIKISRYWSDIP-----------TDQYESLKAQLFTQITRFASGSKIVLTRLCVPCAVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAV-ECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFASELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVL-GLQEQLRQAVQNGDMETSHGIC--RIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPNETTSSLTLTFWYTLQDDILSEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSEKEQFRIYRVDISDTLMYVEMLGA------ELLSNLYDKLGRLLTSYSW
10	PROSPECT2	1gw5a	0.101	0.927	1.847	threading_10	KSKEAEIKRINKELANISKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGYLFIS------------VLVNSNSELIRLINNAIKNDLASRNPTFMNVGSREMAEEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLGVVTAATSLITTLAQKNTSVSLAVSRLSRIVTSASAPWLSVKLLRLLQCYPPPEAVRGRLTECLETILNKQHSNAKNAVLFEAISLIIHPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKRDVSVRQRAVDLAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVDYTWYVDT---ILNLIRIAGDYVSEEVWYRVIQIVINRDQGYAAKTVFEALQAP--------ACHENLVKVGGYILGEF--------G

Predicted Tertiary Structure


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TM-score=0.852 to 1b3uA SCOP code=a.118.1.2	TM-score=0.673 to 1b3uA SCOP code=a.118.1.2	TM-score=0.796 to 1b3uA SCOP code=a.118.1.2	TM-score=0.474 to 1b3uA SCOP code=a.118.1.2	TM-score=0.842 to 2ooeA SCOP code=a.118.8.7