Template-based Modeling Results for YJFC_ECOLI

Submitted Primary Sequence

>Length 387
MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEECCCCCCHHHHHHHCCHHHHHHCCCHHHHHHCCEEEEEHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
542231222430220023200201112312111121001011310121023002200300120023003232002201013200300031133321100000000001421010010113002001000100110011023122123323211200120021014013331000000322221100010002003301120200002201012211001233120210030000110032220200333221001000210110100010003102221100221132332112113210100021331220100224320022232312322100010030142232000000000211000000121332014310200000023
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRDADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGESYVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
1	MUSTER	2iobB2	0.242	0.917	2.810	threading_1	GARLENKGQFDWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYKGN----GFNPAEGLINELAGAWKHS-RARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVK--TGYAVKPIIDLVK------------------------NIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
2	SPARKS	2io7a	0.245	0.972	8.222	threading_2	ISGARLENKGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQG----YKGNGFNPAEGLINELAGAWKH-SRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTG--YAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
3	PROSPECT2	2io7A	0.247	0.972	4.865	threading_3	RLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDE-RGLKVYEYNADSASCHTEAGLILERWAEQG----YKGNGFNPAEGLINELAGAWKH-SRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTG--YAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
4	PPA-I	2iobB2	0.242	0.917	6.360	threading_4	RLENKGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGY----KGNGFNPAEGLINELAGAWKHSR-ARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQIRIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKTG--YAVKPIIDLVK------------------------NIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
5	HHPRED-l	2io8_A	0.244	0.974	9.999	threading_5	GARLENKFDGKWLDEKDPLQNAYVQANGQVINQPYHYYTITESAE-QELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYK----GNGFNPAEGLINELAGAWKHSRARP-FVHIMQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVK--TGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVV-
6	HHPRED-g	2io8_A	0.241	0.977	8.966	threading_6	LLKIRLENKGKWLDEKDPLQNAYVQANGQVINQDYHYYTITESAEQ-ELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGY----KGNGFNPAEGLINELAGAWKHSRARPFVHI-MQDKDIEENYHAQFMEQALHQAGFETRILRLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDEL--VKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
7	SP3	2io7a	0.242	0.972	7.996	threading_7	ISGARLENKGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQG----YKGNGFNPAEGLINELAGAWKH-SRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQILIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKT--GYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI---
8	SAM-T99	2iobB2	0.244	0.889	6.588	threading_8	-----------WLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRHHMITGRMDFCMDERG-LKVYEYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRAR-----PFVHIMQDKDIEENYHAQFMEQALHQAGFETRILGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVK--TGYAVKPI-------IDLVK-----------------NIYQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVK
9	MUSTER	2vpsA2	0.255	0.902	2.717	threading_9	LRRLPTESKANWLDMNNPAERLFVEEFGVVS-----YYESN-HEFHLRCVAYGTQLHAIFMEATAQVIESDEKLRLFAIPEEFWPRIRHSWKYQQTYISGRFDFAFNNEGEVKCFEYNADSASTLLECGLIQQKWAESVGLDKQDTRGSG--FAVERNLKMAWANSGATGRVHFCV-DEEREEQYTALYCMQAAEAVGLEGKLCIFDEFRFDDNGHVVDSDGVRVRNVWKTWMWESAITDYYAAREERGEILYFEPMWKVIPSNKAILPMIYHNHPEHPAILKAEYELTDELRK--HGYAKKPIVN---------------------------MIYQQLFELKKQDDYYAIIGGWMIGDAFSGTGIREDKSVITGVDSPFAAVRIKT
10	SPARKS	2voba	0.243	0.894	6.862	threading_10	RNFLPTESKANWLDMNNPAERLFVEEFGMVSYYESN------HEFHLRCVAYGTQLHAIFMEATAQVIESDEKLRLFAIPEEFWPRIRHSWKYQQTYISGRFDFAFNNEGEVKCFEYNADSASTLLECGLIQQKWAESVGLDK--QDTRGSGFAVERNLKMAWANSGATGRVHFCV-DEEREEQYTALYCMQAAEAVGLEGKLCLFDEFRFDDNGHVVDSDGVRVRNVWKTWMWESAITDYYAAREERGEILYFEPMWKVIPSNKAILPMIYHNHPEHPAILKAEYELTDELRKHG--YAKKPIVNM---------------------------IYQQL--FEKQDDYYAIIGGWMIGDAFSGTGIREPFAAVRIKTD-KLPHPVTL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.893 to 2iobB SCOP code=c.30.1.7	TM-score=0.898 to 2iobB SCOP code=c.30.1.7	TM-score=0.877 to 2iobB SCOP code=c.30.1.7	TM-score=0.883 to 2iobB SCOP code=c.30.1.7	TM-score=0.899 to 2iobB SCOP code=c.30.1.7