Template-based Modeling Results for YJEH_ECOLI

Submitted Primary Sequence

>Length 418
MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT
5532333101010000000000000000000100331011000000000000000000000003201221010000010001000100000000000000000010000002100212111000000000000000002001001101100000000000000000112111111212131211000000000000000010001002203213430130000000000000000000002011102211120000200220002000000000000000000010000001001011231033001301343001100000000000000002013120210010000000000000000002013221200000000000000000001000000000000000123322442235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPAALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGYLACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKSLYALIMLAGLWLLLPKRKTPENGITT
1	MUSTER	3l1lA	0.212	0.971	3.350	threading_1	----AHKVGLIPVTLMVSGAIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA-------AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYYNRLHKNPYPL
2	SPARKS	3ob6a	0.207	0.983	8.127	threading_2	-AD-AHKVGLIPVTLMVSGNIMGSGVFLLPANLAS-TGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILKLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQL----SSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYNRLHKNPYPLD
3	PROSPECT2	3gi8C	0.167	0.986	4.214	threading_3	MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALILLWMSYVISIALFAKGFAGYFLPLINAPTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVALLILGLFIFAGLITIHPSYVIPDLASAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGEPEFFERKVWF-KSTEGLYITSALGVLFALL-----FNMEGVASITSAVFMVIYLFVILSHYILIDEVGGFIVVLGVFLLLLYYQWITNRFVFYGIIATFIIIYRKVTKRTFSYVKS
4	PPA-I	3l1lA	0.209	0.971	4.862	threading_4	----AHKVGLIPVTLMVSGAIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA-------AIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYYNRLHKNPYPL
5	HHPRED-l	3gia_A	0.161	0.978	8.949	threading_5	--LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLINAPTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGLPEFFERKVWFKSTEGLYIT-SALGVLFALL-----FNMEGVASITSAVFMVIYLFVILSHYILIDGGRKEIVIFSFIVVLGVFLLLLYYQFYATFIGVLIFEIIYRKRTFSNNMY-
6	HHPRED-g	3gia_A	0.157	0.976	8.007	threading_6	--LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKAENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGPEFFERKVWF-KSTEGLYIT-SALGVLFALLF-----NMEGVASITSAVFMVIYLFVILSHYILIDEVGGR-KEISFIVVLGVFLTNRFVFYGIIATFIGVLIFEITKRTFSNNMYV
7	SP3	3ob6a	0.209	0.983	7.796	threading_7	-AD-AHKVGLIPVTLMVSGNIMGSGVFLLPANLAS-TGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIAMVVIGVGYLSYFFPILKLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQL----SSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYYNRLHKNPYPL
8	SAM-T99	3l1lA	0.200	0.933	8.343	threading_8	----AHKVGLIPVTLMVSGAIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGRGETY-----------MAAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVT------------
9	MUSTER	3gi9C	0.170	0.986	3.331	threading_9	MELKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDIITGALSILLWMSYVISIALFAKGFAGYFLPLIPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHPSYVIPDAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGLPEFFERKVWF-KSTEGLYITSALGVLFALLF-----NMEGVASITSAVFMVIYLFVILSHYILIDEVSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIRKVTKRTFSN
10	SPARKS	3l1la	0.209	0.971	7.591	threading_10	----AHKVGLIPVTLMVSGAIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAA-------IQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNAEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYYNRLHKNPYPL

Predicted Tertiary Structure


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TM-score=0.684 to 2q6hA SCOP code=f.54.1.1	TM-score=0.690 to 2q6hA SCOP code=f.54.1.1	TM-score=0.704 to 2q6hA SCOP code=f.54.1.1	TM-score=0.714 to 2q6hA SCOP code=f.54.1.1	TM-score=0.685 to 2q6hA SCOP code=f.54.1.1