Template-based Modeling Results for YJCO_ECOLI

Submitted Primary Sequence

>Length 229
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
3231001001112213221220020012004211230011001001221202200200120032211200010010122330221122013001200412133000000000123320331032002001100322333101200010000012021031113200200120032231110011000001202322033113201200110032113200210231235
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADSWFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIEKNKQKALHWLNLSCMEGFDTGCEEFEKLTNG
1	MUSTER	3rjvA	0.644	0.895	2.957	threading_1	--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
2	SPARKS	2xm6a	0.189	0.969	5.546	threading_2	AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT-SGDELGQLHLADMYYFGIG--VTQDYTQSRVLFSQSAEQGNSIAQFRLGYILQG
3	PROSPECT2	3rjvA	0.653	0.882	3.067	threading_3	--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD----SESDAAVDLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
4	PPA-I	3rjvA	0.644	0.895	4.897	threading_4	--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
5	HHPRED-l	1ouv_A	0.161	0.974	3.702	threading_5	--DPKELVGLGASYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDKYAEGCASLGGIYHDGKVVTRDFKKDLKKALASYDKACDLKDSPGCFNAGNMYHHG-EGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKI-
6	HHPRED-g	1ouv_A	0.203	0.969	3.127	threading_6	GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQNTNKALQYYSKACDLKYAEGCASLGGIYHDGVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL----KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE-LENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKIK
7	SP3	2xm6a	0.189	0.969	5.670	threading_7	AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ----GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT-SGDELGQLHLADMYYFGIG--VTQDYTQSRVLFSQSAEQGNSIAQFRLGYILQG
8	SAM-T99	2xm6A	0.202	0.974	5.834	threading_8	AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGYTPAEYVLGLRYMNGQDYAQAVIWYKKAALKGLPQAQQNLGVMYHGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAE----QGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELAAQFNLGNALLQGKG--VKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYY
9	MUSTER	1ouvA	0.203	0.969	2.793	threading_9	GCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQNTNKALQYYSKACDLKYAEGCASLGGIYHDGVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL----KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE-LENGGGCFNLGAMQYNGEG--VTRNEKQAIENFKKGCKLGAKGACDILKQLKKV
10	SPARKS	3rjva	0.644	0.895	4.796	threading_10	--------------------EPGSQYQQQAEAGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDA-AVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTGYAEYWAGFQQGEKGF--IEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.569 to 1w3bA SCOP code=a.118.8.1	TM-score=0.885 to 1ouvA SCOP code=a.118.18.1	TM-score=0.784 to 1ouvA SCOP code=a.118.18.1	TM-score=0.569 to 1w3bA SCOP code=a.118.8.1	TM-score=0.569 to 1w3bA SCOP code=a.118.8.1