Template-based Modeling Results for YJBG_ECOLI

Submitted Primary Sequence

>Length 245
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
CCHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEECCEEHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
43120010000000011010102020113322211212223102200222311311120010012211211232122012201321332223102002102210331322010202011200211332212032211010032322010001122102020231230010022023122033220000102130220200111333231220000000012221242032012100200133135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKQTIVALLLSVGASSVFAAGTVKVFSNGSSEAKTLTGAEHLIDLVGQPRLANSWWPGAVISEELATAAALRQQQALLTRLAEQGADSSADDAAAINALRQQIQALKVTGRQKINLDPDIVRVAERGNPPLQGNYTLWVGPPPSTVTLFGLISRPGKQPFTPGRDVASYLSDQSLLSGADRSYAWVVYPDGRTQKAPVAYWNKRHVEPMPGSIIYVGLADSVWSETPDALNADILQTLTQRIPQ
1	MUSTER	3p42A	0.419	0.906	2.789	threading_1	---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRRLWWPGALLTD-SAAKAKALKDYQHVAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
2	SPARKS	3p42a	0.432	0.906	5.068	threading_2	---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQH-VAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
3	PROSPECT2	3p42A	0.428	0.906	3.605	threading_3	---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQRDRLWWPGALLTDSAAKAKALKDYQH-VAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPH
4	PPA-I	3p42A	0.419	0.906	5.024	threading_4	---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTD-SAAKAKALKDYQHVAQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
5	HHPRED-l	3p42_A	0.439	0.902	10.194	threading_5	--------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQPQLRRLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVP-
6	HHPRED-g	3p42_A	0.437	0.906	7.129	threading_6	--------------------QG-VTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
7	SP3	3p42a	0.432	0.906	4.753	threading_7	---------------------QGVTIYLPGEQQTLSVGPVENVAQLVTQPQLRDLWWPGALLTDSAAKAKALKDYQHVA-QLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKN-NVVITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
8	SAM-T99	3p42A	0.419	0.886	5.496	threading_8	-------------------------IYLPGEQQTLSVGENVAQLVTQPQLRD-RLWWPGALLTDSAAKAKALKDYQHV-AQLASWEAEADDDVAATIKSVRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAGQLPWLAGRSVTDYLQDHPRLAGADKNNV-VITPEGETVVAPVALWNKRHVEPPPGSQLWLGFSAHVLPEKYADLNDQIVSVLTQRVPE
9	MUSTER	2j58A	0.142	0.980	0.850	threading_9	LVNVYPPGLIDQLRPEPVIARSNPQLDNLLKSYEYRIGVGDVLPELTTPAGQYRSASDTGNWVNSDAGKTVSQVRQDITSRLTTIAAFRSQTNIPLTVDAINAAGGLAADADTKISLY-ALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGIQESDATGIFVVRQLGKIADIDASAVLGTEFQLQPYDIVYVTTAPLV---RWNRVISQLVPTISGVHDT
10	SPARKS	2j58a	0.137	0.955	1.181	threading_10	LVNVYPPGLIDQLRPEPVIARSNPQLDNLLKSYEYRIGVGDVLVTVWDHPELTTPAGQYRSASDTGNWKTVSQVRQDITSRLTTYIESPQVDNIPLTVDAINAAGGLAADGKDTKISLYALQKGDLTQNHLLYHGDILFIPSNDDLKVFVGEVGKQSTLKD-RSGTLAEALGNAEGISESDATGIFVVRRTGKIADIDASAVLGTEFQLQPYDIVYVTTA----------PLVRWNRVISQLVPT

Predicted Tertiary Structure


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TM-score=0.436 to 2qsbA SCOP code=a.29.14.1	TM-score=0.438 to 2qsbA SCOP code=a.29.14.1	TM-score=0.436 to 2qsbA SCOP code=a.29.14.1	TM-score=0.438 to 2qsbA SCOP code=a.29.14.1	TM-score=0.439 to 2qsbA SCOP code=a.29.14.1