Template-based Modeling Results for YIDJ_ECOLI

Submitted Primary Sequence

>Length 497
MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF
CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF
56310000000101102000011032120110000032001021010101100000001110110120101112220142211002003311000000000012122211223012312011102002112312333121122113213323223233221112200210020023224232000000002110010101230032023221311331333223323212101321323113101110110000020002100200210343523000000001102000112021321111231010000010142443313100000000000020040322321202100102233222232210001012212211010002220100001223310112430131023013224123012301300220024032212223222322333132311111333333221202321120222320323233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKRPNFLFVMTDTQATNMVGCYSGKPLNTQNIDSLAAEGIRFNSAYTCSPVCTPARAGLFTGIYANQSGPWTNNVAPGKNISTMGRYFKDAGYHTCYIGKWHLDGHDYFGTGECPPEWDADYWFDGANYLSELTEKEISLWRNGLNSVEDLQANHIDETFTWAHRISNRAVDFLQQPARADEPFLMVVSYDEPHHPFTCPVEYLEKYADFYYELGEKAQDDLANKPEHHRLWAQAMPSPVGDDGLYHHPLYFACNDFVDDQIGRVINALTPEQRENTWVIYTSDHGEMMGAHKLISKGAAMYDDITRIPLIIRSPQGERRQVDTPVSHIDLLPTMMALADIEKPEILPGENILAVKEPRGVMVEFNRYEIEHDSFGGFIPVRCWVTDDFKLVLNLFTSDELYDRRNDPNEMHNLIDDIRFADVRSKMHDALLDYMDKIRDPFRSYQWSLRPWRKDARPRWMGAFRPRPQDGYSPVVRDYDTGLPTQGVKVEEKKQKF
1	MUSTER	3ed4B	0.227	0.885	2.808	threading_1	PKQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSLGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNK-KDSKPFFLYVAFTEVHSPLASPKKYLDMYSQY--------------MSAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEDNTIVIFTSDNGPVTREARLRGRKDNLWEGGIRVPAIIKYGKHQGMVSDTPVYGLDWMPTLAKMMNFKLPTDFDGESLVPVLEQKALKREKPLIFGIDMPFQDPTDEWAIRDGDWKMIIDRNNKKYLYNLKSDRYETLNLIG--KKPDIEKQMYGKFLKYKTDIDND-----SLMKARGDKPEAVTWG-----------------------------------
2	SPARKS	2w8sa	0.210	0.909	6.702	threading_2	--RKNVLLIVVDQWRADFIPEGREPFLKTPNLDRLCREGLTFRNHVT-TCVPGPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRAIGYDPALIGYTTTTPDPRTTSARDPRFTVLGDIMDGFRSVGAFEPNMWLPEGEHSVPGATDKPSRIPKEFSDSTFFTERALTYLKGR--DGKPFFLHLGYYRPHPPFVASAPYHAMYKAEDMPAPIRAENPDAEAAQHPLMKHYSGATLDEGEIRQMRATYCGLITEIDDCLGRVFAYLDETGQDDTLIIFTSDHGEQLGDHHLLG-KIGYNAESFRIPLVIKDAGQNGQIEEGFSESIDVMPTILEWLGGETPRACDGRSLLPFLAEGKPSDWRTELHYEFDFRDVFYDLCVIEDENYKYVHFAALPPLFFDLKADPHEFSNLAGDPAYAALVRDYAQKALSWRLSHADR--------------TLTHYRSSPQGLTTRNH-------------------------
3	PROSPECT2	2vqrA	0.226	0.909	5.092	threading_3	--KKNVLLIVVDQWRADFVPHVKIDFLKTPNLDRLCREGVTFRNHV-TTCVPGPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSPNDPRFRVLGDLMDGGFDLPEHRPDIWLPEGEDAVAGATDRPSRIPKEFSDSTFFTERALTYLKG--RDGKPFFLHLGYYRPHPPFVASAPYHAMYRPEDMPAPIRAANPDIEAAQHPLMKFYVDSILDEAELRQMRATYCGLITEVDDCLGRVFSYLDETGQDDTLIIFTSDHGEQLGDHHLLGK-IGYNDPSFRIPLVIKDAGEAGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRPQDWRTELHYEYDFRDVYCSLCVIQDERYKYVHFAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRLKHADRTLT---------------------HYRSGPEGLSERS------------------H
4	PPA-I	2vqrA	0.219	0.909	4.837	threading_4	--KKNVLLIVVDQWRADFVPHGKIDFLKTPNLDRLCREGVTFRNHV-TTCVPGPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSPNDPRFRVLGDLMDGFFDLPEHRPDIWLPEGEDAVAGATDRPSRIPKEFSDSTFFTERALTYLKGR--DGKPFFLHLGYYRPHPPFVASAPYHAMYRPEDMPAPIRAANPDIEQHPLMKFYVDSIRRGSFAELRQMRATYCGLITEVDDCLGRVFSYLDETGWDDTLIIFTSDHGEQLGDHHLLG-KIGYNDPSFRIPLVIKDAGENGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRPQDWRTELHYEYDFRDVYYSLCVIQDERYKYVHFAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRLKHADRTLTHYRSGPEGLSERSH---------------------------------------
5	HHPRED-l	2vqr_A	0.221	0.909	4.731	threading_5	--KKNVLLIVVDQWRADFVPHVLRDFLKTPNLDRLCREGVTFRNHVTTCVP-GPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSNLGDLMDGFHPVGAFEPYFGWVAQNGEHRPDIWLPEGATDRPSRIPKEFSDSTFFTERALTYLKGRD--GKPFFLHLGYYRPHPPFVASAPYHAMYRPEDMPAPIRAANPDIEAHPLMKFYFQSGATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDEGQWDDTLIIFTSDHGEQLGDHHLLGK-IGYNDPSFRIPLVIKDAGEAGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRPQDWRTELHYEYDFRDNDCSLCVIQDERYKYVHFAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRLKHADRTLTHYR-SGPE-------GLS---ER-----------------SH-----------
6	HHPRED-g	2vqr_A	0.211	0.907	4.153	threading_6	--KKNVLLIVVDQWRADFVPHVLRDFLKTPNLDRLCREGVTFRNHVTTCVP-GPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRGVGYDPALIGYTTTVPDPRTTSLGD-LMDGFHPVGAFEGWVAQNGFLPEHRPDIWEGEGATDRPSRIPKEFSDSTFFTERALTYLKGRD--GKPFFLHLGYYRPHPPFVASAPYHAMYRPEDMPAPIRAANPDIEAHPLMKFYVDSGATLDEAELRQMRATYCGLITEVDDCLGRVFSYLDETGQDDTLIIFTSDHGEQLGDHHLLGK-IGYNDPSFRIPLVIKDAGEAGAIESGFTESIDVMPTILDWLGGKIPHACDGLSLLPFLSEGRPQDWRTELHYEYDFRDNDCSLCVIQDERYKYVHFAALPPLFFDLRHDPNEFTNLADDPAYAALVRDYAQKALSWRLKHADRTLTHYRSGPEGLSERS-H--------------------------------------
7	SP3	2w8sa	0.215	0.909	6.486	threading_7	--RKNVLLIVVDQWRADFIPHLREPFLKTPNLDRLCREGLTFRNHV-TTCVPGPARASLLTGLYLMNHRAVQNTVPLDQRHLNLGKALRAIGYDPALIGYTTTTPDPRTTSARDPRFTVLGDIMDGFQNGFELPENREDIWLPESVPGATDKPSRIPKEFSDSTFFTERALTYLKGR--DGKPFFLHLGYYRPHPPFVASAPYHAMYKAEDMPAPIRAENPDAEAAQHPLMKHYIGATLDEGEIRQMRATYCGLITEIDDCLGRVFAYLDETGQDDTLIIFTSDHGEQLGDHHLLG-KIGYNAESFRIPLVIKDAGQNGQIEEGFSESIDVMPTILEWLGGETPRACDGRSLLPFLAEGKPSDWRTELHYEFDFRDVDCSLCVIEDENYKYVHFAALPPLFFDLKADPHEFSNLAGDPAYAALVRDYAQKALSWRLSHADRT--------------LTHYRSSPQGLTTRNH-------------------------
8	SAM-T99	3ed4B	0.249	0.865	4.899	threading_8	-KQPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWLRPRADKMSGEYVSSEVVNWLDNK-KDSKPFFLYVAFTEVHSPLASPKKYLDMYSQYQKQHPDLFYGDWADKPWRG------------------VGEYYANISYLDAQVGKVLDKIKAGEEDNTIVIFTSDNGPVTREARRGRK-DNLWEGGIRVPAIIKYGKHPGMVSDTPVYGLDWMPTLAKMMNFKLPTDFDGESLVPVLEQKALKREKPLIFGIDMPFQDDPTEWAIRDGDWKMIIDRNKPKYLYNLKSDRYETLNLIG--KKPDIEKQMYGKFLKYKTDIDNDSLMKARGDKPEA--------------------------------------------
9	MUSTER	3b5qB	0.225	0.877	2.799	threading_9	-EKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGPHQTNVRSNSSNTRLPENVPTLGSLFSESGYEAVHFGKTHDGSLR-----------GFKHKEPV------AKPFTDPEFP-------------VNNDSFLDVGTCEDAVAYLSN--PPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPDVEDWSNIPTPVQYICCSHRRHWNEENYRHYIAAFQHYTKVSKQVDSVLKALYSTPARNTIVVIADHGD---GAS-HRVTKHISFYDETNVPFIFAGPGIKKKPVDHLLTTLDLLPTLCDLAGIAVPAEKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTPGRVRGPRYKYTHYLGNGEELYD-KKDPGERKNLAKDPKYSKILAEHRALLDDYITRSKDDYRSLKVDADPRCRNHTPGYPSHEGPGAR-EI--LKR--------------------
10	SPARKS	3ed4a	0.231	0.881	5.276	threading_10	--QPNLVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDN-KKDSKPFFLYVAFTEVHSPLASPKKYLDMYSQYM--------------SAYQKQHPDLFYGDWADKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEDNTIVIFTSDNGPVTREDGLRGRKDNLWEGGIRVPAIIKYGKHQGMVSDTPVYGLDWMPTLAKMMNFKLPTDFDGESLVPVLEQKALKREKPLIFIDMPFQDDPTDEWAIRDGDWKMIIDRNNKKYLYNLKSDRYETLNLIG--KKPDIEKQMYGKFLKYKTDIDNDSLMKARGDKPEAVTWG----------------------------------------

Predicted Tertiary Structure


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TM-score=0.759 to 1fsuA SCOP code=c.76.1.2	TM-score=0.661 to 1fsuA SCOP code=c.76.1.2	TM-score=0.671 to 1p49A SCOP code=c.76.1.2	TM-score=0.667 to 1p49A SCOP code=c.76.1.2	TM-score=0.669 to 1p49A SCOP code=c.76.1.2