Template-based Modeling Results for YHIS_ECOLI

Submitted Primary Sequence

>Length 260
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
55231121111112000110123232130141240213123322213121223111231121023103101102122212302112001100200210320222312330220022022021243432201000001243341000101033202110001001232310122313023203102300220031003213332302001001000011212302100000020002000203122131020201010136
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSIDFTPGIINTYHGDIYNCTTNTDNAKTPDTPKWPCDNWEEQQPINSTFSGEGYISDQYDLAQHQLQQINACHTNTTYTNADYSKVVAQLVSLITNIETISSTQLTQQTQSILNQINNIRYEKNKSAECRIIVIANPKPDKAIITKISVEEGIPITFSVQTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNMTGQNLSGFVLTLSRFYFEDLLNINFTDANLGKVRISGEILLG
1	SPARKS	1bupa	0.235	0.935	1.127	threading_1	VGIDL--G--STYHGKVEIIANDQGNRTTPSTDTDAAKNQVAMNPTNTVFDGRRFDDAVVQSDMKHWPQVEYKGETKSFYPEESSMVLTKMKEIAEAYKTVTNAVVTSQRQATKDAGTNINLDKKVGAE-RNVLIFDLGGGTFDVSILTIEDG---IFEVKSTAGDTNHFIAEFKDISENKRAVRRLRTACERAKRTLSSST---QASI---EIDSLYEGID---FYTSITRARFEELNAFRGTDAKLDKSQIHDIVLVG
2	PROSPECT2	1k47a	0.059	0.915	1.223	threading_2	HIAVKTCGKLYEPGQLALIKDIPIYRAEIAFSDSYRIYS-------------DNPDYSLIQETIALGDFLAVRGQNLRPKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSGDLLVLYQSFDRDWGFSISQVKPTLECDFLVGWTKEVAVSSHVQQIKQNINQNFLTSSKETVVSLVEALEQGKSEKIIEQVSQDLQAVAKSSGAGGGDCGIALTKTLKNRWADLGIE---------LLYQERI
3	HHPRED-g	3nb2_A	0.143	0.885	1.210	threading_3	YPPILNEAIIVLSGAILGDVKELSNGGCYIDLSDIQ-ENIL--SVLDNYTKDDKYNHDKVRAAEELIKKISLDEL------AAFRPYVMSLAD------SFSIHPYLNNAQQWLEPICDDFF---DTI-MSW---FNNSIMMYMENGSLLQAGM--YFERHAMVSYNSSFIQIVMNSRRDG--MQERFRELYEVYLKNEKVYPVTQDWLAYNWVL--LSSQD-DGMAMMCSLSHMVDMLSPN-TSTNWMSFYKDGEVQNT
4	PROSPECT2	1ecea	0.072	0.962	1.118	threading_4	AGGGYSGREILDANNVINWFGFETCNYVVHGLWSRDYPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQISALWYTSSVSEATWISDLQALAQRYKCWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQN----------IAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS
5	HHPRED-g	2f3l_A	0.320	0.192	1.048	threading_5	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASYEDVKLIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIG
6	PROSPECT2	1ci9a	0.064	0.962	1.093	threading_6	LRERRLVGAVAALDAPVTRWLPEFRPRLADGSEPLGAGSVYDRLGISDGIDLRDFDLDEN------LRRLASAPLSFAPGSGWQYSLALDVLGAV--VERATGQPLAAAVDALVAQMRDCGFVSAEPERFAVPYHDGQPEPRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRA--NPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWYA
7	HHPRED-g	2o6w_A	0.138	0.308	1.047	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNNLYRLELEREGVNLPRENTDLENAILIGANLQGANLENANLQGANLENANLRGAILTGVNLEETHLKGIETDKNTVWD
8	PROSPECT2	1bhga3	0.102	0.865	1.087	threading_8	VAVTKSQFLINNKHEDADIRGKGFDWPLTSHYPYAEEVMQMCDRYDECPGVGLALPQFFNNVSLHH-----------------HMQVMEEVVRRDKNHPAVEPASHLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADKG------APYVDVICLNSYYSWYHD----------YGHLELIQLQLATQFENWYKKYQKP--IIQSEYGAETIAGFHQDPPLMFTEEYQKSLLEQYHLGLDQKRRKYVVGELIWNFAD
9	PROSPECT2	1pieA	0.071	0.977	1.085	threading_9	EHTDYNGGYVFPASITIGTTGLARLREDKKVKLYSENFPKLGVIEFDLDEVEKKDGELWSNYVKGMIVMLKGAGYEIDKTASGLSSSASLELLVGVVLDDLFNLNVPR--LELVQLGQKTENDYIGVNSGKAIELDCNTLK----YEMVPVELRDYDIVIMNTNKPRALRMQTRLDIQSNLTKFGELLNASHASLKDDYEVTGLETAQKQAGVLGARMTGAGFGGCAIALVSAFRKAVGQVYEEVVGYPASFYVAQITKL
10	MUSTER	3du1X	0.175	0.835	0.807	threading_10	MNVNFQ-HI-NLQEIELTNASTGADYADLRQTRLGKS-NFSHTCLREADLSEWGIDLSEADLYRAILREADL--TGAKLVKTRLEEANLIKASLCG---NLNSANLSR---CLLFQAD-LRPSSNQRTDLGYVLLTGADLSYADLRAASLHH---------ANLDGAKL---CRANFGRT------------------IQWGNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIH-

Predicted Tertiary Structure


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TM-score=0.486 to 1yuwA SCOP code=b.130.1.1	TM-score=0.679 to 1h74A SCOP code=d.14.1.5	TM-score=0.478 to 3ea5B SCOP code=a.118.1.1	TM-score=0.698 to 1eceA SCOP code=c.1.8.3	TM-score=0.360 to 2bm5A SCOP code=b.80.8.1