Template-based Modeling Results for YHHT_ECOLI

Submitted Primary Sequence

>Length 349
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
5533323421010001000000000002000300010000000000010001102422232111110100001101111111102103201310130141013101201300321313002320142011310120011001000100010000000000000203201210221132131111002200300120000100100000000000011010210000000000011001000000000000000112111100000000000110201002021113311001000000100002001000000000000001000221320120000002333424235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFAIVLNPLVTWFIRRGVQRPVAITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELTRKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMTGLSGAMASVLLLVMTVVFMLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLELMGVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYECILVGALFLVVHMVIGNILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKLAILLGPGRPKSRLPG
1	SPARKS	2xwub	0.096	0.980	1.178	threading_1	ISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVMETSHGICRIAVALGEN-HSRALLDQ-VEHWQSFLALVNMIMFCSSLTLTFWYTLQDDILEKQAVYQQVYRPVYFQLVDVLLHK-AQFPSDEEYGFWSFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLTIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGN--PELSVSSVSTLKKICRECKYDLAANIVAVSQDVLMKQIHKTSQC-MWL-MQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEIPNPSNKLLSNLFTTLDISHPNPV
2	PROSPECT2	1ejlI	0.126	0.997	1.787	threading_2	GTVNWSNSNNLESQLQATQAARKLLLIPKFVSFLIQFESAWALTVVDGGAIPAFISLLASPHAHISEQAVWALGNIFRDLVIKHGAIDPLLALLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQI-LPTLVRLLPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSTKIIQVILDAISNIFQAAETEKLSIMIEECGGLDKIEALQRHENESEKYFS
3	PPA-I	3zuxA	0.105	0.822	1.237	threading_3	-----------NILSKISSFIGKTFSLWAALFAAAAFFIPWLLGIIMFGMGLTLKDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLN------------LPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGAMESGLLIFAVVVLHNG------IGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAAAPVV-----AVPGALFSVWHNISGSLLATYWAAKA----------------------------
4	PROSPECT2	1jdha	0.103	1.000	1.725	threading_4	LNDEKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLPAIVEAGGMQALGCLWTLRMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVS
5	PPA-I	1t33A	0.071	0.607	1.120	threading_5	---------------------------------------------------------------------------------------------MTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALQNIAAITYYFGSKEDLYLACAQWIADFLGEKFRPHA--EKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDT----VNLSKFISREQLSPTSAYQLVHEQVIDP-------LHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHIDLILHGLTQ-------------------------------
6	PROSPECT2	1ee4a	0.103	0.997	1.686	threading_6	QENSDDMQEQLSATVKFRQILLQLEAAWALTNIASAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQA-LPTLAKLITETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADCQQNENDKIYEKA
7	PPA-I	3g61A1	0.091	0.628	1.084	threading_7	----------------------------------------------------------------------------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCQIHKIRQKFFHAIMGWFDVHDVGELNTRLTDDVSK---INEGIGDKIGMFFQAMAT--FFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEV-------FKIIDNKPSIDSFSGW
8	PROSPECT2	3a6pA1	0.087	0.960	1.654	threading_8	MMDPNSTCPICVPCGLRLAAIVRHFGLQILEHVVKFRWNGMEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKRMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRR-------RDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQAN-------CRVGVAALNTLAGYIMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRDMTNLVKMGFPSKTDSP
9	PPA-I	3kkdC	0.045	0.567	1.074	threading_9	------------------------------------------------------------------------------------------------GSEQRRQAILDAARLIVRDGVRVRHRAVAAEVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQR-------ILSLGAVHFFQVLGSGQPEQDAKVLTSIILQEYQGLVDGVEQLAVDERAILRRYLNLVGL------------------------------------------------
10	PROSPECT2	1w63A	0.092	0.994	1.612	threading_10	MPAPEDNTYRCRNVAKLLYMHVQGLALCTLGCMGSSEMCRDLAGEVMEMFLPATKNLLNEKNHGVLHTSVVLLTEMPDMLAHFRKLVPQLVRILPFLQVRILRLLRILAQVATNTETSKNVLTIMDIKSESGLRVLAINILLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMGNNIRGMMKELLYFLDSCEPEFKADCASGIFKRWHIDTIMRVLTTAGSYAVPNLIQLITNSVEM--HAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVYDHERMPVMEK

Predicted Tertiary Structure


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TM-score=0.428 to 2j0oA SCOP code=a.250.1.1	TM-score=0.605 to 1qgkA SCOP code=a.118.1.1	TM-score=0.868 to 1ialA SCOP code=a.118.1.1	TM-score=0.402 to 1pv6A SCOP code=f.38.1.2	TM-score=0.403 to 1jqnA SCOP code=c.1.12.3