Template-based Modeling Results for YHAJ_ECOLI

Submitted Primary Sequence

>Length 298
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCHHHCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK
5543220212001001001430001100330220200011002300421301002121130200310210032023003102401210221252231200000211011100020022012213010100121122002202313000000021223223201012002220000002301012233202321213120000222123222222321322210201112011100220100000010001211330201102142212010000012322030111002101311334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWRRDSMGEAKSWCLREIPKLFNGK
1	MUSTER	3fxrA	0.188	0.963	2.353	threading_1	ML-----KLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAR-PDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANA-TRLA--ELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQALPNPTIYVLRRHDLVTPAAAGLIRWIQHHAL--
2	SPARKS	1iz1a	0.154	0.956	4.298	threading_2	------MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGK-FGKTCKLADLRAVELTLFPRGGRPSGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAIRWPDIAFARIV-GTRVKVPISCIFRKEKQPPILARFVEHVRRS-A--
3	PROSPECT2	1iz1a	0.165	0.953	3.541	threading_3	M------EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSR--FFPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPSFADKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRKVPISCIFRKEKQPPILARFVEHVRRS---A
4	PPA-I	3fxrA	0.184	0.966	4.098	threading_4	-----MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFARFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANATRL---AELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNTIYVLRRHDLVTPAAAGLIRWIQHHAL--
5	HHPRED-l	1ixc_A	0.141	0.926	3.394	threading_5	-------EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFF--PRHPGIEIVNIAQEDLYLAVHRSQSGKFGKT-CKLADLRAVELTLFPRGPAVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAIRW--PDIAFARIGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD-
6	HHPRED-g	3hhg_A	0.204	0.956	2.998	threading_6	-----KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNEYPHIRLSLVSSE--GYI-NLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPEYLAKH-GTPQSTEELAGHQCLGFTEPGSLNTWAVLDPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLEQTSKTHPFNAVYYSDKVNLRLRVFLDFLVEELG--
7	SP3	1iz1a	0.165	0.953	4.387	threading_7	M------EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVVPISCIFRKEKQPPILARFVEHVRRSA---
8	SAM-T99	3hhgE	0.212	0.950	4.536	threading_8	----MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNEYPHIRLSL---VSSEGYINLIERKVDIALRAGELD--DSGLRARHLFDSRFRVIASPEY-LAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNSPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTKTHPFNAVYYSDAVNLRLRVFLDFLVE-----
9	MUSTER	3ispA	0.198	0.950	2.209	threading_9	-----QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMG--ASLKRTRITIAVNADSMATWFSAVFDGL---GDVLLDVRIEDQDHSARLLREGVAMGAVTT--ERNPVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDMLAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRV-CDIHLDVPLYWQCWK-LDSPIIARITDTVRAAASGL
10	SPARKS	3fxra	0.184	0.966	4.154	threading_10	ML-----KLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFARFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT---RLAELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNTIYVLRRHDPVTPAAAGLIRWIQHHAL--

Predicted Tertiary Structure


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TM-score=0.666 to 2esnC SCOP code=a.4.5.37	TM-score=0.659 to 2esnC SCOP code=a.4.5.37	TM-score=0.784 to 1iz1B SCOP code=a.4.5.37	TM-score=0.781 to 1iz1B SCOP code=a.4.5.37	TM-score=0.659 to 2esnC SCOP code=a.4.5.37