Template-based Modeling Results for YGFU_ECOLI

Submitted Primary Sequence

>Length 482
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
55423232322323332223133201002000000100001000000000000221202330001000000000000000100001411213000000001000000001011231011000000000000000001000201211111000000000000002000010100311221010100000000000000013123211100000000000000010122021210220100000210212001000000000000000000100000000020032312243022001010000000000200211100110000000202120000000000000000010010011002100000000000000000020013021222320000000000000001003200330120020002100000000000010001223332322333223432313102101102323333434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
1	MUSTER	3qe7A	0.276	0.828	3.076	threading_1	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLFICKG----KIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVKKATGWLPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIEVDYNKAQ-NLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
2	SPARKS	3qe7a	0.282	0.830	5.723	threading_2	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDNKAQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
3	PROSPECT2	3qe7A	0.280	0.830	4.488	threading_3	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLFIC----KGKIPAYLGSSFAFISPVLLLLP---LGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPR---FEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDNKAQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLI------------------------------------S
4	PPA-I	3qe7A	0.280	0.830	6.268	threading_4	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHIN-----------PATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLL---LPLGYEVALGGFIMCGVLFCLVSFIVKKAGTLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
5	HHPRED-l	3qe7_A	0.280	0.824	12.903	threading_5	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFI----CKGKIPAYLGSSFAFISPVLLLLPL---GYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLPAEGQT-PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIEVDYNK-AQNLILTSVILIIGVSGAKVNI---------GAAELKGMALATIVGIGLSLIFKIS-------------------------------------
6	HHPRED-g	3qe7_A	0.279	0.826	10.897	threading_6	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFIC----KGKIPAYLGSSFAFISPVLLLLPL---GYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLPAEGQT-PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIKVDYN-KAQNLILTSVILIIGVSGAKVN--I-------GAAELKGMALATIVGIGLSLIFKLIS------------------------------------
7	SP3	3qe7a	0.285	0.830	11.291	threading_7	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
8	SAM-T99	3qe7A	0.289	0.826	9.369	threading_8	-----------------AIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVL----FHINP-------ATVLLFNGIGTLLYLFICKG----KIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYT---PRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLSKVDYN-KAQNLILTSVILIIGV---------SGAKVNIGAAELKGMALATIVGIGLSLIFKLIS------------------------------------
9	MUSTER	3qe7A1	0.269	0.440	1.214	threading_9	----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HIN-------PATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLL---LPLGYEVALGGFIMCGVLFCLVSFIVKKA--------------------------------------------------------------------------------------------------LP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCV---------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	1pw4a	0.101	0.865	1.004	threading_10	----FKPAPHKARLPAA--EIDPTYRRLRWQIFLGIFFGYAAYYNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSSVSDRSNPRVFLPAGL-----ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMHWWSQKERGGIVSVWNAHNVGGGIPPLLFLLGMAWFNDWHAYMPAFCAILVALFAFAMMRDTPQ-------------------SCGLPPIEEYKNDTAKQIFMQYV--LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKE-------VKHFALDKSSWAYFLYE--YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKATAAGFTGLFGYLGGSVAASAIVGYTVDFFDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------------------------

Predicted Tertiary Structure


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TM-score=0.423 to 2q6hA SCOP code=f.54.1.1	TM-score=0.425 to 2q6hA SCOP code=f.54.1.1	TM-score=0.427 to 2q6hA SCOP code=f.54.1.1	TM-score=0.436 to 2q6hA SCOP code=f.54.1.1	TM-score=0.424 to 2q6hA SCOP code=f.54.1.1