Template-based Modeling Results for YGFI_ECOLI

Submitted Primary Sequence

>Length 298
MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH
CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH
4312201101000100321101200330211102103001300421212002123120100300220032013003202201210231245211000000100020003001100440210101002113310121023320000000121224233232010021231200011123133233131023221000213220200100010043021202000202211000000331110000020013213222010020243212111000001335211200200121222235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTATMLQHIAEDRDGTSH
1	MUSTER	1iz1B	0.148	0.973	3.126	threading_1	---MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDGELSVAYFGTPIYSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQED---LYLAVHRSQSGKFGKKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI-RWPDIAFARIVGTRVKV-PISCIFRKEKQPPILARFVEHVRRSAKD
2	SPARKS	1iz1a	0.149	0.966	5.019	threading_2	---MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDGELSVAYFGTPYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQED---LYLAVHRSQSGKFGKKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA-IRWPDIAFARIVGTR-VKVPISCIFRKEKQPPILARFVEHVRRSA--
3	PROSPECT2	3k1mA	0.148	0.973	4.386	threading_3	ME---LRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGHFFYQYAIKLLSNVDQMVSMTKRIASVEKTIRIGFVGSLLFLLPRIIHLYRQAHPNLRIELYEMGTKAQTEALKEGRIDAGFGRLKISDPAIKHTLLRNERL---MVAVHASHPLNQMKHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAAGEGISLVPASTQS-IQLFNLSYVPLLDPDAIT-PIYIAVRNMEESTYIYSLYETIRQIYTE
4	PPA-I	1iz1B	0.148	0.973	5.065	threading_4	---MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDGELSVAYFGTPYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQED---LYLAVHRSQSGKFGKKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI-RWPDIAFARIVG-TRVKVPISCIFRKEKQPPILARFVEHVRRSAKD
5	HHPRED-l	1ixc_A	0.147	0.936	3.417	threading_5	----EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRAAAGDVGELSVAYFGTPYRSLPLLLRAFLTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQED---LYLAVHRSQSGKFGKTCKLADLRAVELTLFPRRPSFADEVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVAAI-RWPDIAFARIVGTRVKVPISCIFR-KEKQPPILARFVEHVRRSAK-
6	HHPRED-g	1ixc_A	0.150	0.940	3.127	threading_6	----EFRQLKYFIAVAEAGN-AAAAKRLHVSQPPITRQ-QALEADLGVVLLE-----IELTAAGHAFLEDARRILELAGRSGDRSRAAARGDGELSVAYFGTPYRSLPLLLRAFLTSTPTATVSLTH-TKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQE---DLYLAVHRSQSGKFTCKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALT-AGAASSIVPASVA-AIRWPDIAFARIVGTRVKVP-ISCIFRKEKQPPILARFVEHVRRSAKD
7	SP3	1iz1a	0.149	0.966	5.355	threading_7	---MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGVGELSVAYFGTPYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIAQED---LYLAVHRSQSGKFGKKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA-IRWPDIAFARIVGTR-VKVPISCIFRKEKQPPILARFVEHVRRSA--
8	SAM-T99	1iz1B	0.149	0.966	3.597	threading_8	---MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAARGDVGELSVAYFGTPIRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVNIA---QEDLYLAVHRSQSGFGKTKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI-RWPDIAFARIVG-TRVKVPISCIFRKE-KQPPILARFVEHVRRSA-
9	MUSTER	3fxrA	0.162	0.973	2.658	threading_9	--MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWGHITFAASAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTD---LEAQPLSDVVIVGQRQHPMANATRLAELQECRWAFSSA--PRGPGAIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNFKDQLCSIPLQD-ALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL
10	SPARKS	3fxra	0.161	0.980	4.745	threading_10	--MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGREGHITFAASPAIAAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLE-AQPLYVSDVVIVGQRQHPMANATRLAELQECRWAFSSAPRGPG--AIIRNAFARYGLPPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERAFKDQLCSIPLQD-ALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHAL

Predicted Tertiary Structure


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TM-score=0.819 to 1iz1B SCOP code=a.4.5.37	TM-score=0.818 to 1iz1B SCOP code=a.4.5.37	TM-score=0.811 to 1iz1B SCOP code=a.4.5.37	TM-score=0.695 to 2fyiC SCOP code=c.94.1.1	TM-score=0.892 to 1iz1B SCOP code=a.4.5.37