Template-based Modeling Results for YFJD_ECOLI

Submitted Primary Sequence

>Length 428
MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCEEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEECCEEEEEEEECCCCEEEEEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
55422100100000000000000000000001013210220243233102202201320320000010000000000000010001200110000000000000000012000200111102100100010000011001000100100020003002132322222311331021003313330243012002000213312011010121100001132313100320141310100002312210000010110021113333123310130023000003113012002201533320000001111020000021001300120222223322320111231000020202031014104131243213001000020033012212202023010100103431021010022432443338
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE
1	MUSTER	3hf7A	0.913	0.297	1.138	threading_1	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG-----------------------------------------------------------------------------------------------------
2	SPARKS	3oi8a	0.233	0.350	3.363	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAQEVFDADTLLRLEKVLDFSDLEVRDAITRSRN--VLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYFNPEQ----FHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------
3	PROSPECT2	3oi8A	0.233	0.350	1.684	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYFNPE----QFHLKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDII---------------------------------------------------------------------------------------------------------E
4	PPA-I	3hf7A	0.913	0.297	3.210	threading_4	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG-----------------------------------------------------------------------------------------------------
5	HHPRED-l	3lhh_A	0.297	0.276	2.153	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAGE---RLELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF--------------------------------------------------------------------------------------------------
6	HHPRED-g	3lhh_A	0.297	0.276	1.989	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TISSL-VPRSDIVFLDLNLPLDANLRTV-QSPHSRFPVCRNNVDD-VGIISAKQLLSESIAGERL---ELVDLVKNCNFVPNSLSG-ELLEHFRTTGSQ-VFVVDEYGDLKGLVTLQD--DALTGEFF--------------------------------------------------------------------------------------------------
7	SP3	3oi8a	0.240	0.350	2.839	threading_7	----------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAQEVFDADTLLRLEKVLDFSDLEVRDAITRSRNVLK--ENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYF-NPEQFH---LKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------
8	SAM-T99	3hf7A	0.913	0.297	4.096	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG-----------------------------------------------------------------------------------------------------
9	MUSTER	3oi8A	0.240	0.350	1.113	threading_9	----------------------------------------------------------------------------------------------------------------------------------------------------------------------SNASAEDVLNLLRQAHEVFDADTLLRLEKVLDFSDLEVRDAITRSRNV--LKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYF-NPEQFH---LKSILRPAVFVPEGKSLTALLKEFREQRNH-AIVIDEYGGTSGLVTFEDIIE---------------------------------------------------------------------------------------------------------
10	SPARKS	3ocma	0.253	0.341	3.171	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFG-VEERNVSGVLTLAERSIRSIT-PRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEGRVR----RNRLRDPIIVHESIGI-LRLDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELP--------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.484 to 2ef7A SCOP code=d.37.1.1	TM-score=0.504 to 2rc3C SCOP code=d.37.1.1	TM-score=0.504 to 2rc3C SCOP code=d.37.1.1	TM-score=0.509 to 2rc3C SCOP code=d.37.1.1	TM-score=0.484 to 2ef7A SCOP code=d.37.1.1