Template-based Modeling Results for YFIB_ECOLI

Submitted Primary Sequence

>Length 160
MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEECCEEEEECCCCCEECCCCHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCCCCHHHHHHCCEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
4222100000000000210313424212311221322202212210000023101012222301330131022002102312312010100012213221021002200200120003113023200102011332200213123112311211010225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKHLVAPLVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
1	MUSTER	2k1sA	0.319	0.863	2.664	threading_1	--------------------YYMDVQEAKLRDKMRGTGVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG-VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLS-P
2	SPARKS	2lbta	0.305	0.819	4.088	threading_2	--------------------------GQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPAAYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARG-VAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN--
3	PROSPECT2	2k1sA	0.307	0.875	2.999	threading_3	YMDVQEAKL-------------------RDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG-VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSHH
4	PPA-I	2k1sA	0.291	0.881	4.877	threading_4	------------------YYMDVQEAKLRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQG-VDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSPL
5	HHPRED-l	2aiz_P	0.226	0.831	3.554	threading_5	------------------CSSSNNDAAGNGAAQTFGYSVADLQQR----Y-NTVYFGFDKYDITGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGK-GVDAGKLGTVSYGEEKPAVLGHDEAAYSKNRRAVLAY---
6	HHPRED-g	3ldt_A	0.203	0.863	4.085	threading_6	---------------GLVASIYRDSKRKIIRDLQQDIQYVEYGDTRTLIIPTDKYF--SSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSR--KRKLSQAQAET--TFLWANG-IAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTS
7	SP3	3td3a	0.387	0.744	3.995	threading_7	------------------------------------MELT-----EDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGS
8	SAM-T99	2k1sA	0.304	0.863	4.796	threading_8	--------------------YYMDVQEAKLRDKMRGTGVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQ-GVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP-
9	MUSTER	2kgwA	0.326	0.806	2.507	threading_9	--------------------APPGPP--------ASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARG-VAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVVN--
10	SPARKS	3td3a	0.378	0.744	4.069	threading_10	-----------------------------------------MELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGS

Predicted Tertiary Structure


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TM-score=0.702 to 1r1mA SCOP code=d.79.7.1	TM-score=0.668 to 2aizP SCOP code=d.79.7.1	TM-score=0.658 to 2aizP SCOP code=d.79.7.1	TM-score=0.703 to 1r1mA SCOP code=d.79.7.1	TM-score=0.715 to 1r1mA SCOP code=d.79.7.1