Template-based Modeling Results for YFCV_ECOLI

Submitted Primary Sequence

>Length 187
MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEECCCCCCEEEEEEEEEHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCEEECCCCCEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL
4431011000000000000000011113302010101012110202243431201002000320432223222202020210114233201010101222222220000122322221200000001222221321222322114321112241301010100000123212102010102020112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKFVKTAIAAAMVMGAFTSTATIAAGNNGTARFYGTIEDSVCSIVPDDHKLEVDMGDIGAEKLKNNGTTTPKNFQIRLQDCVFDTQETMTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSYKSGMGIDQKIVKDTATNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL
1	MUSTER	2jtyA	0.222	0.845	2.051	threading_1	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGASSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLAL-QSSAAGSATNVGVQILDRTGAALTLDGAT-----FSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
2	SPARKS	3jwne	0.222	0.818	3.870	threading_2	---------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLAL---ENTVSAAAGLGIQLLNEQQNQIPLNAPSSA---LSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
3	PROSPECT2	2jtyA	0.228	0.845	2.313	threading_3	AA----------------------TTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGASSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQSSAAGS-ATNVGVQILDRTGAALTLDGATF-----SSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYA
4	PPA-I	2j2zB	0.210	0.765	2.234	threading_4	------------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFFSDSRIRVTFDGVRGETPDKFNLS-------GQAKGINLQIADVRGNIARAGKVMPA-------IPLTGNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE
5	HHPRED-l	2jty_A	0.223	0.840	4.208	threading_5	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQ-SSAAGSATNVGVQILDRTGAALTLDGATFS-----SETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQY-
6	HHPRED-g	2uy6_B	0.225	0.759	4.124	threading_6	------------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDT------NGGTGL-AIVV-QGAGKNVVFDGEGD-------ANTLKDGENVLHYTAVVKKVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.222	0.818	3.868	threading_7	---------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGTTPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLAL---ENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWTTL---TPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jtyA	0.212	0.834	4.611	threading_8	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGASSAVGFNIQLNDCDTNVASKAAVAFLGTADAGHTNVLAL--QSSAAGSATNVGVQILDRTGAALTLDGATF-----SSETTLNNGTNTIPFQARYFATGAA-TPGAANADATFKVQY-
9	MUSTER	2jmrA	0.221	0.824	2.047	threading_9	--------------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGTTPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLAL---ENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTT---LTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
10	SPARKS	2jtya	0.222	0.845	3.534	threading_10	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGASSAVGFNIQLNDCDTNVASKAAVAFLGTAIDAGHTNVLALQS-SAAGSATNVGVQILDRTGAALTLDGAT-----FSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.673 to 1klfP SCOP code=b.2.3.2	TM-score=0.671 to 1klfP SCOP code=b.2.3.2	TM-score=0.688 to 1klfP SCOP code=b.2.3.2	TM-score=0.619 to 1klfP SCOP code=b.2.3.2	TM-score=0.789 to 2j2zB SCOP code=b.2.3.2