Template-based Modeling Results for YFCQ_ECOLI

Submitted Primary Sequence

>Length 162
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCEECCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
321001000000000021123201020101022101023121020102201132032321222010200021123423110101021232222310010212100000112123032221010122322320201000122232212302010001020123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
1	MUSTER	2jmrA	0.182	0.883	1.575	threading_1	-----------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATPVVPFRILLSPCGNAVSA-VKVGFTGVADSHNANLLALEASGLGIQLLNQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
2	SPARKS	3jwne	0.183	0.877	3.118	threading_2	------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATPVVPFRILLSPCGNAVS-AVKVGFTGVADSHNANLLALENTGLGIQLLNQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
3	PROSPECT2	2w07B	0.183	0.741	1.726	threading_3	N----------------------------VYIPPCTINNGQNIVVDFGNINPEHVDNSRGEVTKTISISCPYGS------LWIKVTGNMGGGQNNVLATNITHFGIALYQGK-----GMSTPLT---LRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
4	PPA-I	2j2zB	0.171	0.864	2.446	threading_4	---------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCELFSDSRIRVTFDGVRGETPDKFLSGQAKGINLQIADRGNIARAGKMPAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
5	HHPRED-l	2uy6_B	0.173	0.858	4.104	threading_5	---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDGGTGL-AIVVQGAGKNVVFDGSDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTY-
6	HHPRED-g	2uy6_B	0.180	0.858	3.918	threading_6	---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDTGTGL-AIVV-QAGKNVVFDGEGANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.183	0.877	3.136	threading_7	------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLALEAAGLGIQLLEQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
8	SAM-T99	2w07B	0.193	0.735	2.454	threading_8	---------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSRGEVTKTISISCPYG------SLWIKVTGNTMGGGQNVLATNITHFGIALYGKGM------STPLTL---RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
9	MUSTER	2j2zB	0.171	0.864	1.543	threading_9	---------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSDSRIRVTFDGVRGETPDKFLSGQAKGINLQIADRGNIARAGKVMAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
10	SPARKS	2uy6b	0.199	0.870	3.107	threading_10	---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAKGTVKLAFTGPIVNGHSDELDTGGTGLAIVVQGAGKNVVFDEGDANTLKDGENVLHYTAVVKKAVGAAVTEGAFSAVANFNLTYQ

Predicted Tertiary Structure


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TM-score=0.706 to 1pdkB SCOP code=b.2.3.2	TM-score=0.825 to 2j2zB SCOP code=b.2.3.2	TM-score=0.702 to 1klfP SCOP code=b.2.3.2	TM-score=0.595 to 1pdkB SCOP code=b.2.3.2	TM-score=0.818 to 2j2zB SCOP code=b.2.3.2