Template-based Modeling Results for YFCG_ECOLI

Submitted Primary Sequence

>Length 215
MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
CEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
20100102121011000002204030200202013122222200410132300000132223213200001000000000320321014223100001100011001001000100001200332122002201210230020013203412000122000000000000000231313022010021002203212200200212222334344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS
1	MUSTER	3gx0A	1.000	0.949	3.821	threading_1	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL-----------
2	SPARKS	3gx0a	1.000	0.949	3.796	threading_2	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL-----------
3	PROSPECT2	3gx0A	0.995	0.949	4.311	threading_3	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQAL-----------L
4	PPA-I	3gx0A	1.000	0.949	3.952	threading_4	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL-----------
5	HHPRED-l	3c8e_A	0.403	0.981	1.909	threading_5	PLQLYSLGTPNGQKVTIMLEELGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHN---PPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGGLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTLHERHD-
6	HHPRED-g	3c8e_A	0.387	0.986	2.291	threading_6	PLQLYSLGTPNGQKVTIMLEELGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIPALRDHTHN---PPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGGFGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGNVVLGFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQ
7	SP3	3m8na	0.286	0.912	3.702	threading_7	LYKLYSQRSGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKNPSGQVPLLETAP------GRYLAESNAILWYLAV--GTSLAPDTRDRAEALQWFFEQH-ALEPNIGSAYFWLCLVKGGRDLQTHALEDWLERGYAALQVELKTNDYFAAGQLTIADIALYGYTHVADQCDFDLSTFPAVNAWLRRVEQTPGFITDWTP----------
8	SAM-T99	3gx0A	1.000	0.949	5.162	threading_8	MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALL-----------
9	MUSTER	3m8nA	0.286	0.912	3.133	threading_9	LYKLYSQRSGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKNPSGQVPLLETAP------GRYLAESNAILWYLAV--GTSLAPDTRDRAEALQWFFEQHA-LEPNIGSAYFWLCLVKGGRDLQTHALEDWLERGYAALQNHLKTNDYFAAGQLTIADIALYGYTHVADQCDFDLSTFPAVNAWLRRVEQTPGFITDWTP----------
10	SPARKS	3m8na	0.286	0.912	3.663	threading_10	LYKLYSQRSGNSYKVRLALALLDAPYRAVEVDILRGESRTPDFLAKNPSGQVPLLET------APGRYLAESNAILWYLAV--GTSLAPDTRDRAEALQWFFEQH-ALEPNIGSAYFWLCLVKGGRDLQTHALEDWLERGYAALQVELKTNDYFAAGQLTIADIALYGYTHVADQCDFDLSTFPAVNAWLRRVEQTPGFITDWTP----------

Predicted Tertiary Structure


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TM-score=0.849 to 1jlvA TM-score=0.999 to native SCOP code=a.45.1.1	TM-score=0.849 to 1jlvA TM-score=0.999 to native SCOP code=a.45.1.1	TM-score=0.849 to 1jlvA TM-score=0.999 to native SCOP code=a.45.1.1	TM-score=0.851 to 1jlvA TM-score=0.999 to native SCOP code=a.45.1.1	TM-score=0.849 to 1jlvA TM-score=0.999 to native SCOP code=a.45.1.1

Experimental Structure

Download 3gx0A

SCOP code=a.45.1.1