Template-based Modeling Results for YFCA_ECOLI

Submitted Primary Sequence

>Length 269
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
45201101110000000000000000000001101000000000001000010100010000000000001002332121110110000000000000000210222002100000000000000013322333433422111100000000000000001000000000000002121110100010010000000000000003000000000000100002000200212133001000000000000100020002101111124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN
1	PROSPECT2	2bkuB2	0.092	0.929	1.474	threading_1	TDTVAETSASISTFVMLQELQSNILTVLAAVIRKSPGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKY------LETFSPYLLKALTAVGFIADISNSLEEDFRRYSDAMMNVLAQM------------ISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVNGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFI-AQVAEDPQLYSEDATSRAAVGLIGDIAAMQFYGQDWVIDYIKRTRSG
2	PROSPECT2	1ejlI	0.123	1.000	1.433	threading_2	LQATQAARKLPIQFESAWALTNIASGQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLLSTLACGYLRNLTWTLSNLAPPLDAVEQILPTLVSCWAISYLTDGPNERIEKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLFKTQKEAAWAITNYTSGGTVEQIVYLVIIQVILDAISNIFQAAEEKLSIMIEEC
3	PROSPECT2	1ee4a	0.086	1.000	1.426	threading_3	LSATVKFRQIMLQLEAAWALTNIASAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNANKPSLIRTATWTLSNLCALPTLAKLIDTETLVDACWAISYLAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVILPALRLLLSSPNIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLTKKEACWAISNASSGGLQRPDIIRYLVIIEVTLDALENILKMGEADKEARGLNI
4	PROSPECT2	3a0oA3	0.059	1.000	1.397	threading_4	GEQLSAFADAVAKDPNHCGWAEFYEKSVEPWLETRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLLGYNVRQFAGVTGNGHYQWYFDHIKFYNYGWWDLNFDDLVYRHDYPQV
5	PROSPECT2	1yq7A	0.104	0.996	1.383	threading_5	EQDFVQHFSQIVRVLTIGDAIARLKEVLEYNAIGGGLTVVVAFRELVQDADSLQRAWTVGWCVELLQAFFLVADYQKPGVGLDAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMA-GIDGEKEHANAKKILLEMGEFFQIQDDYLDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYELPAVFLQYEEDSYSHIMALIEIY
6	MUSTER	3zuxA	0.143	0.907	0.813	threading_6	IIMFGMGLTLKPSDILFKHPKVVIIGVIAQFA--MPATAWCLSKLLNLPAEIAVGVILVGCCGGTASNVMTYLARGNV-ALSVAVTSVSTLTSPLLTPAIFLMLAAGMLMSIVKMVLLPIVLGLIVHKVLGS-----------KTEKLTDALPLVS----VAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTLPYDAQKALTIEVGSGLAAALAAAHPVVAVPGALFSVWHNISGSLLATYWAAKA-------
7	SPARKS	3eqxa	0.090	0.952	0.948	threading_7	AETLPILKACIPARAALAELKQAGELLPN-----------QGLLINLLPLLEAQGSSEIENIVTTTDKLFQYAQEDSQADPTKEALRYRTALYQCFTQLSNRPLCVTTALEICSTIKSVQDVTSLTNQATGEVQDDVDPLIKAAHYQFEAIHPFIDG--NGRTGRVLNILYLIDQQLLIVAKQDYYRLLLNVTTWQPWIIFILNAWTTHKIAAARELIAHTTEYVRQQLPKIYSHELVQVIFEYCRIQNLVESGRQTASVYLKQLCDIG
8	PROSPECT2	1xm9A	0.078	1.000	1.367	threading_8	GLTIPKAVQYKYQAIGAYYIQHTCFQAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFQLTGLLWNLSSTDELKEELIADALPVLADNATGCLRNLSSADAGRQTMIDSLMAYVQNCVAASRCDDKLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALSKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTEDILSSACYTVRNLMAAEAARLLLSDMWSS
9	PPA-I	3zuxA	0.112	0.933	0.851	threading_9	IIMFGMGLTLKPSDILFKHPKVVIIGVIAQFAIM-PATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAAGMLMSIVKMVLLPIVLGLIVHKVLGS----------KTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-------
10	HHPRED-l	3o7q_A	0.143	0.907	0.711	threading_10	LPQFQQAFTLTNFQAGLIQSAPIPAGILMKKLSYKAGYALGAALAEIMNYTLFLGLFIIAAGLGCLTAANPFVTVLGPESSAQTFNSFGAIIAVVFGQSLILSNSVQTPYMIIVAIVLLVALLIMLKPALQSDNHSDAKQGSFSA------------------------SLSRLARIRHWRWVLAQFCYVGAQACWSYLRYAVIGMTAGFALTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFGGHALTLCSAFMI-

Predicted Tertiary Structure


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TM-score=0.439 to 1j30A SCOP code=a.25.1.1	TM-score=0.770 to 3ea5B SCOP code=a.118.1.1	TM-score=0.666 to 1ialA SCOP code=a.118.1.1	TM-score=0.673 to 1ialA SCOP code=a.118.1.1	TM-score=0.621 to 1j0nA SCOP code=a.102.3.2