Template-based Modeling Results for YFBR_ECOLI


  Submitted Primary Sequence

>Length 199
MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL
4400201110210220221221331322100100000000000000011331223010310000000010010012101211321123012113101210122003202330131012013332323312100200100000020021122223312101210210132330310210021002203111321243234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFHLSLDEISQDSPL
1MUSTER2parB0.9940.8942.834threading_1-KQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASAVLTGDLPTP--------AQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFH------------
2SPARKS3mzoa0.2540.9905.148threading_2GGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEED-AGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELRE-LSEVEESTKNFISREIPATFQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPEFVEIYSEALATIYEYREASVKYFLKEILPDLAEKGIEKTELPQL
3PROSPECT23mzoA0.2540.9902.606threading_3GGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEED-AGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTE-LRELSEVEESTKNFISREIPATFQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPEFVEIYSEALATIYEYREASVKYFLKEILPDLAEKGIEKTEEITT
4PPA-I2parB0.9940.8943.159threading_4-KQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASAVLTGDLPTP--------AQEYKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSFH------------
5HHPRED-l2paq_A1.0000.8597.041threading_5-KQSHFFAHLSRLKLINRWPL-RNVRTENVSEHSLQVA-VAHALAAIKNRKFGGNVNAERIALLA-YHDASEVLTGDLPTP---------QEYKAIEKIAQQKLVD-VPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQE-DYF-EIFVPSFH------------
6HHPRED-g2paq_A1.0000.8595.743threading_6-KQSHFFAHLSRLKLINRWPL-RNVRTENVSEHSLQVA-VAHALAAIKNRKFGGNVNAERIALLA-YHDASEVLTGDLPTP---------QEYKAIEKIAQQKLVD-VPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQE-DYF-EIFVPSFH------------
7SP33mzoa0.2540.9905.191threading_7GGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEED-AGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELRE-LSEVEESTKNFISREIPATFQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPEFVEIYSEALATIYEYREASVKYFLKEILPDLAEKGIEKTELPQL
8SAM-T992parB0.9770.8894.809threading_8-KQSHFFAHLSRLKLINRWPLMRNVRTENVSEHSLQVAMVAHALAAIKNRKFGGNVNAERIALLAMYHDASAVLTGDLPTPAQE--------YKAIEKIAQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQEMDYFMEIFVPSF-------------
9MUSTER3mzoA0.2590.9902.636threading_9GGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFFGAVEEDA-GNEVNWRALYEKALNHDYSELFIGDIKTPVKYAT-TELRELSEVEESTKNFISREIPATFQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPEFVEIYSEALATIYEYREASVKYFLKEILPDLAEKGIEKTELPQL
10SPARKS1wpha0.9590.8593.787threading_10-KQSHFFAHLSRLKLINRWPL-RNVRTENVSEHSLQVAV-AHALAAIKNRKFGGNVNAERIALLAY-HDASEVLTGDLPTPQ---------EYKAIEKIAQQKLVD-VPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAKTRLEATLEARRSQ--EDYFEIFVPSFH------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.770 to 1xx7A
TM-score=0.997 to native
SCOP code=a.211.1.1		 TM-score=0.770 to 1xx7A
TM-score=0.997 to native
SCOP code=a.211.1.1		 TM-score=0.781 to 1xx7A
TM-score=0.860 to native
SCOP code=a.211.1.1		 TM-score=0.777 to 1xx7A
TM-score=0.851 to native
SCOP code=a.211.1.1		 TM-score=0.770 to 1xx7A
TM-score=0.997 to native
SCOP code=a.211.1.1

  Experimental Structure

Download 2parB
SCOP code=a.211.1.1