Template-based Modeling Results for YEIB_ECOLI

Submitted Primary Sequence

>Length 385
MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
4410201010000000000000000000121122121121211110000100010001010000000000000000012022101000000000000000001201000000000000010021221020000000000000000000001123232232212200110122113120012000110100010000000100020000000000002111131322022011000000000000000000011202111100000110011000000000000000000221111200100110010000110000000000011001123022110000000000000000100031043000100010001211232234348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITPRDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLFWDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRAWTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRSGWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPFQAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTTLFYHLGLFMHFDRLELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGPAISKTSR
1	MUSTER	1qgkA	0.102	0.943	1.001	threading_1	WNCKAAGVCLMLLATCC-IVPHVLPFIKEHIKNPDW------RYRDAAVMAFGCIL-PSQLKPLVIQAMPTLIELMKD---PSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADEPATYCLSSSFELIVQKLLETTDRQNNLRSSAYESLMEIVKNSCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKDALQISDVVAGSGGVQEDALMAVSTLVEVLMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALFCDEVMQLLLENLGN--NVHRSVKPQILSVFGDIALAI-------GEFKK--LEVVLNTLQQASQAQVDKSDYD
2	SPARKS	2xwub	0.102	0.992	1.001	threading_2	CVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELLVLGLQEQLRQAVQDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEGFWSSDEKEQFRIYRVDISDTLMYVYEMLAELLSNLYDKLGRLLWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLI---SPYIQQLEKLAEEIPVHILGLLSNLFTTLDISHPNPV
3	PROSPECT2	1jdha	0.079	0.992	1.851	threading_3	KKEASRHAIMRSPQMVSAIVRTMAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHKMVALLNLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR---AGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTMEEIVEGCTGALHILHNRIVIRGLNTIPLFVRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAA
4	PPA-I	3zuxA	0.088	0.800	1.118	threading_4	----NILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPY-----------------IPWLLGIIMFGMGLTLKPSDFDILFKH------PKVVIIGVIA----QFAIMPATAWCLSKLLNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVA-----LSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHK-------VLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQ--------NSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA--------------------------
5	PROSPECT2	1ee4a	0.048	0.971	1.789	threading_5	QELPQMTQQLSATVKFRQILPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLC-----------RGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQN
6	PPA-I	3g61A1	0.081	0.800	1.055	threading_6	AAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNGWFDVHD--------VGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDN-----------------KPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLQQLMT----------------------------------------------------
7	PROSPECT2	1ejlI	0.090	0.979	1.772	threading_7	VEDIVKGSQLQATQAARKLLSPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNL-----CRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNIIQQVVNHGLVPFLVGVLSKADFKWAITNYTSGGTVEQIVYLVHCGIIEPLMNL--LSAKDTKIIQVILDAISNIFQAATEKLSIMIEECGGLDKIEALQR-HENESVYKASLN
8	PROSPECT2	3a6pA1	0.076	0.953	1.762	threading_8	AMDQVNALCEQLVKAVTVMM------------------DPNSTQRYRLCVPCGLRLAEKTQVAIVRHFGLQILEHVVKFRWNGMSRLEKVYLKNSVMELIANGTLNDALSRIVVEMIKREWPQHWPDMLIELDTLSETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTFLRSSTQMTWGALFRHEILRASMTNLVKMGFPSKTDSPTF
9	PROSPECT2	1qsaa	0.070	1.000	1.744	threading_9	NPTLPPARTLQSRFVNELARWRGLLAFSPEKPGTTLTGKSQPNACDKLFSVWRASQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASATVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLADEWRYWQADLLLERGNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYAFNNQWWDLSVQATIAWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQETVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVWLGNSAGRIDAVAFYDAYYRYFMGDKPTLMS
10	MUSTER	3orgA	0.137	0.964	0.942	threading_10	LRLVCFLTLLGVTAALFIFAVDLAVHGLEELRM---KISRLAGRFAGYILYVVSGVALCLLSTFWCAVLGLPQMKSILSGFYDKMLRVLFAKALGLICAIGGPVG-NVHIACIIAHQFYRLGVFKLRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELDVSRTQTLLYAILGALMGVLGALFIRCVRSIYELRMRHYPGTNRYFLVGVVALFASALQYPFPRATINDLFKELILMPIIKFILVALSIGLVFVPSFLIGAGFGRLYGELMRVVFPGSYAVVGAAAFTAGVTRALSCAVIIFE--VTGQIR--------LVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRSP

Predicted Tertiary Structure


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TM-score=0.621 to 1qgkA SCOP code=a.118.1.1	TM-score=0.434 to 1h6gA SCOP code=a.24.9.1	TM-score=0.607 to 1m8xA SCOP code=a.118.1.8	TM-score=0.663 to 1wa5B SCOP code=a.118.1.1	TM-score=0.421 to 1j30A SCOP code=a.25.1.1