Template-based Modeling Results for YEGI_ECOLI

Submitted Primary Sequence

>Length 648
MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC
CCCCCEEECCCCCEEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC
553322022231110100110051020100102232300000013322222221101001112131222001110000114213000000110322211210111122332223021310010011001001101411000010212000013312010000211302231211202110131001112223212223313100000000000000101211121222223123201110221221112223332232223212121012201200210023221122211031002002201331230221222011231230110223231212112113311222131122312111221212121321223213121311221212220110120000000110010213121001001000000100121222312023123113303210320131024212231011121102301321221132133111212311322212300320203202021002211100311101000102220033031113200200020112014202232332112211210122012222401210220022023121212321221121022002301212132342
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTNIKVFTSTGELTTLGRELGKGGEGAVYDIEEFVDSVAKIYHTPPPALKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYSPAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDSDSFQINANGTLHLCEVGVSHFTPPELQTLPSFVGFERTENHDNFGLALLIFHVLFGGRHPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQAFTESGVATGRPTAKAWVAALDSLRQQLKKCIVSAMHVYPAHLTDCPWCALDNQGVIYFIDLGEEVITTGGNFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYIILLEIALSALSLLLCGLQAEPRYIILVPVLAAIWIIGSLTSKAYKAEVQQRREAFNRAKMDYDHLVRQIQQVGGLEGFIAKRTMLEKMKDEILGLPEEEKRALAALHDTARERQKQKFLEGFFIDVASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASCERRFVFRPNEAITPADRQAVMAKMTAKRHRLESALTVGATELQRFRLHAPARTMPLMEPLRQAAEKLAQAQADLSRC
1	MUSTER	2pziA	0.148	0.855	1.424	threading_1	LNPGDIVA----GQYEVKGCIAHGGLGWIYLALDGRPVVLKGLVHSGAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDVGYIVMEYVGGQSLKQ-------------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVS---RINSFGYLYGTPGFQAPE-----IVRTG-PTVATDIYTVGRTLAALT-LDLPTRNGRYV----------------------------DGLPEDDPVLKTYDSYGRLLRRAIDP--DPRQRFTAEEMSAQLTGVLREV---VAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPDVAASVLQATVLSQPVQTLDSLRAARHESVELPLMEVRALLDLG-DVAKATRKLDDLAERVGWRWRLYRAVAELLTGDYDSATKHFTEVLDTF---GELAPKLALAATAELAGNKFYQTVWSTNDVISAAFGLARARSAEG-------DR-------VGAVRTLDEV-PPTTARL-TSAVTLLVT-----EEQIRDAARRVEAL---PPTEPR----VLQIRALVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARV-QRHRYTLVDM
2	SPARKS	2pzia	0.161	0.863	2.200	threading_2	LNPGDIV----AGQYEVKGCIAHGGLGWIYLALDGRPVVLKGLVHSDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDVGYIVMEYVGGQSLKQ-------------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLIDLGAVS---RINSFGYLYGTPGFQAPEIVRTG------PTVATDIYTVGRTLAALT-LDLPTRNGRYVDGL----------------------------PEDDPVLKTYDSYGRLLRRAIDP--DPRQRTTAEEMSAQLTGVLREVVA---------QDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPTDVAASVLQATVLSQ--------PVQTLDSLRAARHGDFSESVELPLMEVRALLD--LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-TGDYDSATKHFTEVLDT---FPLAPKLALAATAELAGNTDEHKFYQTVW---STNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT-----LLVTEEQIRDAARRVALPPTEPRVLQIRALVLGGALDWLKDNSTNHILGFPFSHGLRLGVEASLRSLARVAPT
3	PROSPECT2	2pziA	0.111	0.873	2.855	threading_3	RSGASEGWCPYAGQYEVKGCIAHGGLGWIYLALNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVTDRHGDPVGYIVMEYVGGQSL-------------KQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ-LKLID---LGAVSRINSFGYLYGTPGFQAPEIVRT------GPTVATDIYTVGRTLAALT-LDLPTRNGRYVDGLPEDDPVLKT----------------------------YDSYGRLLRRAI--DPDPRQRFTAEEMSAQLTGVLREVVAQDTGV------------------PRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGDFSESVELPLMEVRALLDL--GDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDEHKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVQIRDAARRVEALPPTEPR----VLQIRALVLGGALDWLKDNKASTNHI----LGFPFTSHGLRLGVEASLRSLARVMANKVRP
4	PPA-I	3f69B	0.189	0.424	1.606	threading_4	-----TTPSHLSDRYELGEILGFGGMSEVHLARDLRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVQTIGTAQYLSPEQAR-----GDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVRE------------------DPIPPSARHEGLSADLDAVVLKALAK--NPENRQTAAEMRADLVRVHNGEPPEAPKV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	HHPRED-l	2h34_A	0.191	0.347	1.265	threading_5	------------GPYRLRRLVGRGG-GDVYEAEDERIVALKL-SETLSSR-QREARTAGRLQEPHVVPIHDFG-------EIDGQLYVD-RLINGVDLAA-LRRQ-------GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI--------------GTLYY-APERFS-----E----YRADIYALTCVLYECL-TGSPPYQGDQ-----LSV-GAHINQ--------------AIPRPSTVRPGIPVAFDAVIARG-AK--NPEDRVTCGDLSAAAHAALA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-g	2h34_A	0.203	0.358	1.200	threading_6	------------GPYRLRRLVGRGG-GDVYEAEDERIVALKL-SETLSSDPVFRTR-QREARTAGRLQEPHVVP-IHDFGEIDGQLYVD-RLINGVDLAA-LRRQG-------PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGI--------------GTLYY-APE-----RFSE----YRADIYALTCVLYECL-TGSPPYQGDQL-SV-GAHINQ------------------AIPRPSTVRPGIPVAFDAVIARG-AKNPE-DRYVTCGDLSAAAHAALA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	SP3	2pzia	0.169	0.867	2.361	threading_7	FLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDGRPVVLKGLVHSDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRGDPVGYIVMEYVGGQSLKQ-------------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT-EEQLKLIDLGAVSR---INSFGYLYGTPGFQAPE-----IVRTG-PTVATDIYTVGRTLAALT-LDLPTRNGRYV----------------------------DGLPEDDPVLKTYDSYGRLLRRAIDP--DPRQRTTAEEMSAQLTGVLREV---------VAQDTGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTANEIVTALSVPLVDPTDVAASVLQATVLSQ--------PVQTLDSLRAARHGDFSVELPLMEVRALLDLGDVA----KATRKLDDLAERVGWRWRLVWYRAVAEL--LTGYDSATKHFTEVLDTFPGE-LAPKLALAATAELAGNTDEHKFYQTVW---STNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVT-----LLVTEEQIRDAARRVALPPTEPRVLQIRALVLGGALDWLKDNLGFPFTSHGLRLGVEASLRSLAVAPTQRHRY
8	SAM-T99	3f69B	0.192	0.401	1.205	threading_8	-----TTPSHLSDRYELGEILGFGGMSEVHLARDHRDVAVKVLRADLDPSFYLRFRREAQNAAALNHPAIVAVYDTGETPA-GPLPYIVMEYVDGVTLRDIV-------HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVD---FGIARDSGNSVQTIGTAQYLSPEQARG-----DSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVR------------------EDPIPPSARHEGLSADLDAVVLKALAK--NPENRYTAAEMRADLVRV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	MUSTER	3qa8A	0.147	0.890	1.289	threading_9	---------------EMKERLGTGGFGYVLRWIHGEQVAIKQCRQESPKNRERWCLEIQIMKKLNHPNVVSVPDG-LQKLAPNDLPLLAMEYCEGGDLRKYLNQF----ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL-----LEQKKYTVTVDYWSFGTLAFECIT-GFRPFLPNWQPVQ----WHGKVRIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCML--MWHQRTDPQ-VGCFQALDSILSSVMNMVSGRVHTYPVTENEKSWLQQDTGIPEELLQASGLALNSAQPLTVIDCTDLIFLFDNRKISLPAHPESLQDPKRPLTYTHLRRVWGQIW-QTIRALKEDCARLL--QGQRTSMVNLLRYNTELSKKKNSMTSECEQLKAKLDFFRSSIQIDLEKYSEQMGIEKLLSAWREMEQAVELCEREVQALVDKMMALQTDSVDLQRNPTLDDL-----------EEQARDLYR----RLRERPRD--QRTPGDSNDMVRLLILAIQSFEKR----------VILIYDQLSKTVVCKRKALELSPKVKEVMNLMREDEKI--------VVRRQEKRQQELWNLLKC
10	SPARKS	1o6ya	0.206	0.390	2.012	threading_10	------TPSHLSDRYELGEILGFGGMSEVHLARDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR------------AIAQYLSPEQA-----RGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVRE------------------DPIPPSARHEGLSADLDAVVLKALAK--NPENRQTAAEMRADLVRVHN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.546 to 1ql6A SCOP code=d.144.1.7	TM-score=0.545 to 1ql6A SCOP code=d.144.1.7	TM-score=0.529 to 1ql6A SCOP code=d.144.1.7	TM-score=0.530 to 1ql6A SCOP code=d.144.1.7	TM-score=0.599 to 1ql6A SCOP code=d.144.1.7