Template-based Modeling Results for YEEP_ECOLI

Submitted Primary Sequence

>Length 236
MIQLFRVVISEQIIDNSEPVKCKRRTTLGKSLLFSRVLYREWWPATYCSRVSGYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQLFRVVISEQIIDNSEPVKCKRRTTLGKSLLFSRVLYREWWPATYCSRVSGYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF
CCEEEEEEEEHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQLFRVVISEQIIDNSEPVKCKRRTTLGKSLLFSRVLYREWWPATYCSRVSGYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF
43210100022201332331202242211210001100023101010011010022102300000000202230120011002201322332000000101302313312222221222102203210210141032112000000332220310010012002331212212213332423201220232022003200200220001200210021012000100200021013
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIQLFRVVISEQIIDNSEPVKCKRRTTLGKSLLFSRVLYREWWPATYCSRVSGYRDILPELDLVLWLIKADDRALSVDEYFWRHILQCGHQQVLFVVTQADKTEPCHEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALPDHAASPLMTRLQDELRTESVRSQAREQFTGAVDRIFDTAESVCIASVARTVLRAVRDTVVSVARAVWNWIFF
1	MUSTER	3ievA	0.185	0.869	1.116	threading_1	KAGTVLGVKNIQIIFLDTPGIYEPKKSD----------------VLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKN---------------VLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLMITDLPLRLLAAEIVREKAMMLVPTSIAVKINEIKPGDANNLKPIIIGQRLKEIGKRARQELELILY
2	SPARKS	3r9wa	0.205	0.847	3.051	threading_2	RVLGVKNIPNEQIIFLDTPGIYEPKKS----------------DVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGP---------------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANQRLKEIGKRARQELELILRPV-----Y
3	PROSPECT2	1g55a	0.084	0.953	1.167	threading_3	PLRVAQVVAANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDPPNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIENGNSRLRYFLIAKLQSEPLPFQAPGLEDDTDVNQYLLPPKSLLRYALLLDIVQPTRRSVCFTKGY-----------GSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKLRYFTPKEIANLKQRYRLLVHVVAKLIKILYE
4	PPA-I	3ievA1	0.207	0.614	1.584	threading_4	RVLGVKNIPNEQIIFLDTPGIYEPKKSD----------------VLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKN---------------VLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMIT------------------------------------------------------------
5	HHPRED-l	1wf3_A	0.162	0.839	2.626	threading_5	RPKRLRGILTRQIVFVDTPGLHKPMDALGEFM------------------DQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLGKVPILLVGNKLDAAKYPE------------------EAMKA-YHELLPEAEPRMLSALDERQVAELKADLLALMPDYASDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAEREERPSQKAIVIEKIKEIGQATRKQLEALL-
6	HHPRED-g	1wf3_A	0.140	0.911	2.973	threading_6	KSTLLNNLLGVKVAPIPRPQTTRKRLRGILTEGRRQIVFVDT-PGLHEFMDQEVYEALADVNAVVWVVDLRHPPTPED-ELVARALKPGKVPILLVGNKLDAAKYPE------------------EAMKAYHELLPE-AEPRMLSALDERQVAELKADLLALMPDYASDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAERENGLYIKAILYVERPSIVIGEGGRKGKKVY
7	SP3	3r9wa	0.180	0.919	3.040	threading_7	IVTLLNNLLGTKVIISPKAGTTRMRNIPNE----AQIIFLDTSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGP---------------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANQRLKEIGKRARQELELILRPVYLELWV
8	SAM-T99	3ievA	0.177	0.932	3.419	threading_8	KSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNINEAQIIFLDTPGIYEPMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKI---------------GPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGVIKGEIIVDRENLKPIIIGKKGQRLKEIG-
9	MUSTER	3ievA1	0.214	0.614	1.029	threading_9	IIGTVLGVKNIQIIFLDTPGIYEPKKSD----------------VLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKN---------------VLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMIT------------------------------------------------------------
10	SPARKS	3ieva	0.202	0.860	2.284	threading_10	RMRVLGVKNIPQIIFLDTPGIYEPKKS----------------DVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGP---------------AKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDANQRLKEIGKRARQELELILRPV--YLEL

Predicted Tertiary Structure


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TM-score=0.635 to 1wf3A SCOP code=c.37.1.8	TM-score=0.662 to 1wf3A SCOP code=c.37.1.8	TM-score=0.581 to 1wf3A SCOP code=c.37.1.8	TM-score=0.583 to 1g55A SCOP code=c.66.1.26	TM-score=0.598 to 1wf3A SCOP code=c.37.1.8