Template-based Modeling Results for YEDN_ECOLI

Submitted Primary Sequence

>Length 173
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHEEECCCCHHHCCCCCCCHHHEECCCCCHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
43210220230033322201013120120231132021010221102213123102101012121220241131011000231102403211230110002313021022113202101003130330220033002020211131012012113000131120221102323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
1	SPARKS	3g06a	0.178	0.977	3.080	threading_1	FSNPLTHLPA-LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPLPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNLTSLPMLPSGLLSLSVYRNQLTR--LPESL-
2	PROSPECT2	3cvrA1	0.222	0.988	2.938	threading_2	RNEAVSLLKECLINQFSELQLNRLNLSSLPDLPPQITVLEITQNALISLELPASLEYLDACDNRLSTLPELPASLKHLDVDNNQLT-LPELPALLEYINADNNQLTLPEL-PTSLEVLSVRNNQLTFLPELPESLEALDVSTNLESLPAVPTPTCTIILEDNPLSSRIRQPDP
3	PPA-I	3g06A3	0.195	0.711	4.050	threading_3	--------------------IFSNPLTHLPALPSGLCKLWIFGNQLTSLPLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLALPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNR------------------------------
4	HHPRED-l	3cvr_A	0.232	0.948	2.203	threading_4	RNEAVSLLKECLINQFSELQLNRLNLSSLPDLPPQITVLEITQNALISLPLPASLEYLDACDNRLSTLPELPASLKHLDVDNNQLT-LPELPALLEYINADNNQLT-LPELPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLESLPAVP---IFFRCRENRITHIIR----
5	HHPRED-g	3g06_A	0.225	1.000	1.561	threading_5	GESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNRLTSLPALPSGLKELIVSGNRLTSLPLPESL
6	SP3	3g06a	0.174	0.994	2.906	threading_6	LNSGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLALPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNLASLPTLPSELYKLWAYNNRLTSLALPSGL-
7	SAM-T99	3g06A	0.194	0.983	2.240	threading_7	RAAVVQKMRACLNNGNAVLNVGESGLTTLPDLPAHITTLVIPDNNLTSLPLPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPM-LPSGLQELSVSDNQLASLPT--
8	SPARKS	1jl5a	0.198	0.994	2.988	threading_8	REMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPLPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPENSSFLKIIDVDNNSLKLPDLPPSLEFIAAGNNQLEELPELLPFLTAIYADNNLKKLPDLPLSLESIVAGNNILEELPELQNL-
9	PROSPECT2	1jl5a	0.220	1.000	2.722	threading_9	REMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENFSGLSELPPNLYYLNASSNEIRSLCLPALP
10	PPA-I	3bz5A3	0.116	0.994	3.330	threading_10	LNKKITKLDVTPQTQLTTLDCSFNKITELDSQNKLLNRLNCDTNNITKLDLNIQLTFLDCSSNKLTEIDTPLTQLTYFDCSVNPLTELDSTLSKLTTLHCIQTDLLIDTHNTQLIYFQAEGRKIKELDTHNTQLYLLDCQAAITELDSQNPKLVYLYLNNTELTELDVSHNT-

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.746 to 1g9uA SCOP code=c.10.2.6	TM-score=0.746 to 1g9uA SCOP code=c.10.2.6	TM-score=0.736 to 1g9uA SCOP code=c.10.2.6	TM-score=0.742 to 1g9uA SCOP code=c.10.2.6	TM-score=0.746 to 1g9uA SCOP code=c.10.2.6