Template-based Modeling Results for YEDI_ECOLI

Submitted Primary Sequence

>Length 305
MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH
42200000010010000001000100210023101000110101021022141322011000001110012001001010011012100100110000000121012003202333343332212322341223222311322130011000000000000001202322112201110010111222220110100101100000032222102201200110001002000000000000010000010011001002200110110011002000100000000000000021022232334
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLNAQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCFEGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVAITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALGKGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPTVLNLILGFIIGGIVVLGVKAVEKMRGQAH
1	PROSPECT2	1ee4a	0.089	1.000	1.456	threading_1	QELPQQEQLSATVKFRQILSREHRPPIDVVIQAGVVMRENASGTSAQTKVVVDADAVPLFIQLLYTGSVEKEQAIWALGNVAGDSTDYRDYVLQCNAMWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEENADFIEKAGGMEKIFNCQQNEN
2	PPA-I	3g61A4	0.138	0.928	1.183	threading_2	VILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKENNLEEAKRLGIK-KAITANISMGAAFLLIYASYALAFWYGTSLVIS----KEYSLDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLI-------LGI---ISFITFFLQG---FTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPK----NTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYFENVLLVFSAI
3	PROSPECT2	1ejlI	0.134	1.000	1.435	threading_3	QLQATQAARKLLSRIDNIIRAIPKFVSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVHGLVPFLVGVLSQKEAAWAITNYTSGGTVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDK
4	PPA-I	3g61A1	0.103	0.957	1.141	threading_4	LYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVG--------NVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEDVHDVGELNTRLTD-----DVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYL
5	PROSPECT2	2bkuB2	0.072	0.957	1.390	threading_5	TDTVAETSASISTFVMDKLGQTAQSLQELQSNILTVLAAVIRKSPSSVEPV-ADMLMGLFFRLLEKK-DSAFIEDDVFYAISALAASLGKGFEKYLETFS-----PYLLKALNQVDSPITAVGFIADISNSLEEDFRRYSDAMMNVLAQMELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAE----DPQLYSEDATSRAAVGLIGDIAAMFKQFYGQDWVIDYIKRTTKDTARWAREQQKRQLSL--
6	PROSPECT2	1jdha	0.095	1.000	1.382	threading_6	VNKAAVMVHQLSKKVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMSKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEAREDITEPAICALRHLTSRHQEAEMAQNAVRLVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEPLTELLHSRN
7	PROSPECT2	1xm9A	0.070	0.980	1.315	threading_7	QAIGAYYIQHTICKLVDLLRSPNQNVQQAAAGALRNLVFR---STTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVL---ADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDALMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTSEDILSSACYTVRNLMASQP
8	MUSTER	3g61A4	0.151	0.957	0.668	threading_8	ILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLA-AIRTVIAFGGQKELNNLEEAKRLGIK-KAITANISMGAAFLLIYASYALAFWYGTSLVIS------YSLDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLI-LGIISFITFFLQFGKAGEILTK---RLRYMVFKSMLR-VSWFDDPKNTTGALTTRLANDAAQVKGASRLAVIFQNIANLGTGIIISLIENVLLVFSAIVFGAMAVGQVSSFAPDYAKAT
9	SPARKS	2xwub	0.084	0.970	0.741	threading_9	LLKLIPLVLGLQEQLRQAVGDMETSHGICRIAVA--LGENH---SRAL--LDQVEHWQSFLALVNMIMFCSSLTLTFWYTLQDDILSFEAEKQAVYQQVY-RPVYFQLVDVLLHKAQFPSDEEYG-FWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLTSYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHAELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMQIHKTSQCMWLMQALGFLLSALQ
10	PROSPECT2	3a0oA3	0.106	0.895	1.300	threading_10	LWLNSEQLSAFADAVAK--DPNHCGWAEFYEKSV-----------EPWLERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDA--SRKWLLAVAAWDTKGATSVALAWGYDWLYDHLSEDERRTVRSVLL-ERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTP----------------ACIALQGESDEAGEWLDYTVEFLATWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.477 to 1h6gA SCOP code=a.24.9.1	TM-score=0.601 to 1wa5B SCOP code=a.118.1.1	TM-score=0.422 to 1zs4A SCOP code=a.35.1.9	TM-score=0.415 to 1werA SCOP code=a.116.1.2	TM-score=0.793 to 1ialA SCOP code=a.118.1.1