Template-based Modeling Results for YEBN_ECOLI

Submitted Primary Sequence

>Length 188
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG
42101000000000000000000200113313112002000000001000000000001001200110010000000000002001200332333333334321011000000000010000000001120210000000000000000000000210021012102000000000000100021025
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQILWTHFHG
1	SPARKS	1t56a	0.154	0.899	1.109	threading_1	RPLADI-------SVDDLAKGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPATDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVE------VAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSEAR------VLDTLVHIWVTSIYG
2	PROSPECT2	1pw4A2	0.078	0.952	1.230	threading_2	TALWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV---------YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTWDGGFMVMIGGSILAVILLIVQELVP
3	PPA-I	1pw4A2	0.094	0.963	1.153	threading_3	KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNP-------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDGGSILAVILLIVVMIGEKRRHEQL
4	SPARKS	1pb6a	0.110	0.920	1.101	threading_4	LSAALDTFSQFGTRLEQIAELVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFRFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDALIDEKSALIAGWVKS---GK---LAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDFNQTVENVQRIIIE---------G
5	PROSPECT2	1t33A	0.106	1.000	1.156	threading_5	MNKSQLIAAALAQFGEGLHATTRDIAALAGQNIKEDLYLACAQWIADFLGEKFRPHAEKAERLFRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRFDEEKAELIYQTVTCHIDLILHGLTQ
6	PPA-I	3o7pA1	0.125	0.936	1.070	threading_6	QAFFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL----------GPESSGHFRLNLAQTFASFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQT--PYMIIVAIVLLVALLIMLTKFPA
7	SPARKS	2g3ba	0.102	0.888	1.033	threading_7	LKASATAIAQRGIRVNDVAEVVSPGLLYYHFKDRIGLLEAALNYINDRARAYR-----SEGEGGDSARDRLTRSLLPEVVENSLAWNELRASAVYEEALRDP--LARTTAAWVSEIADAIVQAQATGEISRSLDPQPTAVTTALVEGLSGRWLCKEISTEDA--RSHLLGAIDVVS------------
8	PROSPECT2	1r2fA	0.101	0.947	1.098	threading_8	ISLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEP----------LKKKIASVFLESFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLKLFALDLLLCYNANKALLAALSP
9	PPA-I	2oerB	0.103	0.771	1.014	threading_9	PNKAAILFRLQSDEWRRTTRLLGEILEDTTRPLERLRRLVLAFVRSECEEAAIRVALSDAAPLYRDADEAREVKAEGARVFQAFLREAL-----------PEVAEAERSLAGDLLTTTLGAVGKQFSEQPRSEAEIERYAEALADLCAYLAALGER--------------------------------
10	SPARKS	3lhqa	0.114	0.931	1.015	threading_10	LDVALRLFSQQGTSLAEIANAVTRGAIYWHFKNKSDLFSEIWELSESNIGELEIEYQAKFPDDPLSVLREILVHILEATVTEERRRLLMEIIFHKCEFVGEMVVVQQAQRSLCLESYDRIEQTLKHCILPENLLTRRAAILMRSFISGLMENWLFA--PQSFDLKKE-----------ARAYVTILLE

Predicted Tertiary Structure


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TM-score=0.909 to 1pw4A SCOP code=f.38.1.1	TM-score=0.833 to 1u9nA SCOP code=a.4.1.9	TM-score=0.875 to 1pw4A SCOP code=f.38.1.1	TM-score=0.895 to 1pw4A SCOP code=f.38.1.1	TM-score=0.865 to 1pb6A SCOP code=a.4.1.9