Template-based Modeling Results for YEAP_ECOLI

Submitted Primary Sequence

>Length 341
MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEECCCCCCCCCCCHHHHCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS
53231022002102432213200320020023004220000000123220000000321331212321202231110210022301012312321130210222100000000011330100010000133343223201200211212011002111203312311200101011110110000100120012002103343220000000012031010300020001001200200241114210001011110000023133210120032002103110202401000000000000013223201100200020001023443200000231236
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSDQIIARVSQSLAKEQSLESLVRQLLEMLEMVTDMESTYLTKVDVEARLQHIMFARNSQKMYIPENFTVSWDYSLCKRAIDENCFFSDEVPDRWGDCIAARNLGITTFLSTPIHLPDGSFYGTLCAASSEKRQWSERAEQVLQLFAGLIAQYIQKEALVEQLREANAALIAQSYTDSLTGLPNRRAIFENLTTLFSLARHLNHKIMIAFIDLDNFKLINDRFGHNSGDLFLIQVGERLNTLQQNGEVIGRLGGDEFLVVSLNNENADISSLRERIQQQIRGEYHLGDVDLYYPGASLGIVEVDPETTDADSALHAADIAMYQEKKHKQKTPFVAHPALHS
1	MUSTER	2v0nA	0.213	0.962	1.764	threading_1	IDDVMLFARVRSLTRFKLVIDELRQREASGRRMLDGLGGRVLIVDDNERQAQRVAAELGVEHRP----VIESDPEKAKISAGGPVVIVNAAAKNFDGLRFTAAL---------RSEERTRQLPVLAMVDPDDRGRMVKALEIPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSSPFTVHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAHHHH
2	SPARKS	3mtka	0.181	0.469	4.226	threading_2	------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLEFLAFYDELTGLPNKNSLIRWLNLKVS---QDCIDTYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKAFKIGFDRFAIICKSENISDFIE----RLSQLLLPYNVNGNLIR-VNFNIGAAQIEAAA-----NLRRCDLALIKAKEEGLNEYVIFKPIEIQ
3	PROSPECT2	1w25A	0.214	0.988	3.499	threading_3	SIEANVRLLEAKLTAEMDGPTALATVCRKLKDDPTTRHIPVVLITALDRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVAAGVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGRQLPVLAMVDPDDRGRMVKALEDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGTVAHGREMLNV-TISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAA---H
4	PPA-I	3pjwA1	0.232	0.519	3.599	threading_4	------------------------------------------------------------------------------------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQASS-GYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECETQNLVTRIRGGEFAVLAPGMTREEALQLAQSLDSALSSLYATGATDVA-AVASIGLAPFA-HGDSPQAVLSLGDQALAQAEGQGEQNWACLD-----
5	HHPRED-l	1w25_A	0.199	0.956	5.423	threading_5	ANVRLLEAKLTAVSTAMDGPTALAMAARD-----LPD---IILLDVMMHIPVVLIALDGRGDRLASDFTKPIDDVMLAKIAGVDLVIVNAAAKNFRFTAALREERTRQLPVLAMVDPDDRG-RMVKA---LEIGVNDILSIDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGPFTVAGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAH---
6	HHPRED-g	1w25_A	0.202	0.930	4.641	threading_6	IDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDNERQAQRVA-AELGV-EHRPVIESNAAAKNFDG------LRFTAALRSEERT----------RQLPVLAMVDPDEIGVN--DILSRPIDELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVGSPFTVAREMLNV-TISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAVVGKAAH---
7	SP3	3mtka	0.200	0.469	4.406	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLEFLAFYDELTGLPNKNSLIRWLNLKVSQDCID---TYLIFLEVRDLEKLNVTYGYDLVDELIIHISKRIKDIAGEGNKAFKIGFDRFAIICKSEN---ISDFIERLSQ-LLLPYNVNGNLIR-VNFNIGAAQIEAAA-----NLRRCDLALIKAKEEGLNEYVIFKPIEIQ
8	SAM-T99	3iclA	0.272	0.463	4.213	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTVTGLPNRQLFCDRLLQALAAHERDGNPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTVARIGGDKFTILLNGADTLNGALVAQKILDGLAQPFVFGAQQ-IVISVSIGIAVSPADG-ETEQLLRNADTA-YHAKSRGKNNYQFFSP----
9	MUSTER	3pjwA	0.231	0.534	1.703	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------AALFQEQAERSEKLRTESYQDNLTGLANRRYFEMQLNARVSNPEQASS-GYLLLLRVKDLAGLNQRLGGQRTDELLKAVGEQLSRECETQNLVTRIRGGEFAVLAPGMTREEALQLAQSLDSALSSLYATGATDVA-AVASIGLAPFA-HGDSPQAVLSLGDQALAQAEGQGEQNWACLDGDDHH
10	SPARKS	3brea	0.195	0.903	4.076	threading_10	DQAMIGEAVRRSLASEAGIDFHFCSDPQQAVAVANQIKPTVILQDLV---------MPGVDGLTLLAAYRGNPATR-----DIPIIVLSTKEEP-TVKSAAFAAGANDYLVKLPDAIE-------------LVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESSHDQPRPGSH-LTVSIGVSTLGGGGQTFRVLIEMADQALYQAKNNGRNQVGLMEQ----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.723 to 2v0nA SCOP code=c.23.1.1	TM-score=0.659 to 2v0nA SCOP code=c.23.1.1	TM-score=0.629 to 2v0nA SCOP code=c.23.1.1	TM-score=0.697 to 2v0nA SCOP code=c.23.1.1	TM-score=0.616 to 2v0nA SCOP code=c.23.1.1