Template-based Modeling Results for YDIQ_ECOLI

Submitted Primary Sequence

>Length 254
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN
CEEEEEEEECCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEECCHHHCCCCCCCCCEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN
21000001101343221123322011230313003001000100020133332000000012221112002200010021000021231330111000200010023211100000211122213200100031040110100010212232010112133211102020100000123122131110310111143202212021032232212011010222343433210123312200220032024215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIITCFKLVPEEQDIVVTPEYTLNFDNADAKISQFDLNAIEAASQLATDDDEIAALTVGGSLLQNSKVRKDVLSRGPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLIFGEGSGDLYAQQVGLLVGEILQLPVINAVSAIQRQGNTLVIERTLEDDVEVIELSVPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIDWSQSAPLAELVGIRVPPQTERKHIIIDNDSPEAIAELAEHLKKALN
1	MUSTER	2a1uB	0.241	0.965	3.015	threading_1	LRVLVAVKRVIDYAVIRVKPDRGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLEVIAVSCGPA--QCQETIRTALAMGADRGIHVEVPPAEALGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVERAIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDL-TSKLSVISVEDPPQRTAGVKV------ETTEDLVAKLKEIGR
2	SPARKS	1efvb	0.231	0.972	5.562	threading_2	LRVLVAVKRVIDYAKIRVKPDRGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLT-SKLSVISVEDPPQRTAGVKV------ETTEDLVAKLKEIGR
3	PROSPECT2	1efvb	0.237	0.965	3.929	threading_3	LRVLVAVKRVIDYAKIRVKPDRTVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVVIAVSCGPA--QCQETIRTALAMGADRGIHVEVPEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVD-LTSKLSVISVEDPPQRTAGVKVET------TEDLVAKLKEIGR
4	PPA-I	1efpB	0.252	0.953	3.972	threading_4	MKVLVPVKRLIDYNKARVKSDGSVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVDDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVD-VAPRLEVVSVREPEGRKAG--IKVGSVDELVGKL---------
5	HHPRED-l	1o97_C	0.235	0.937	6.569	threading_5	MKILVAVKQTAALEDFEIREDGDVDEDFMMYDLNEWDDFSLEEAMKIKESDTEVVVVSVGPDR--VDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKDNKAVIRRELEGGLQEVEINCPAVLTIQLGINKPRYAS----------PIEEVSLADIGLSAAQSMSRVRRMYIPE-KGR-ATMIEGTISEQAAKIIQIINEF--
6	HHPRED-g	1efp_B	0.248	0.953	6.598	threading_6	MKVLVPVKRLIDYNKARVKSDGSVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVADVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVD-VAPRLEVVSVREPEGRKAGIKV------GSVDELVGKL-----
7	SP3	1efvb	0.231	0.972	5.693	threading_7	LRVLVAVKRVIDYAKIRVKPDTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLT-SKLSVISVEDPPQRTAGVKV------ETTEDLVAKLKEIGR
8	SAM-T99	2a1uB	0.244	0.953	6.224	threading_8	LRVLVAVKRVIDYAKIRVKPRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKVKEVIAVSCGPAQCQ--ETIRTALAMGADRGIHVEPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVERAIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSK-LSVISVEDPPQRTAGVKVET------TEDLVAKLKE---
9	MUSTER	1efpB	0.258	0.945	3.001	threading_9	MKVLVPVKRLIDYNKARVKSDGGVDLANVKMSMNPFDEIAVEEAIRLKEKGQEIIAVSIGVK--QAAETLRTALAMGADRAILVVADVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDV-APRLEVVSVREPEGRKAGIKV--GSVDELVGKL---------
10	SPARKS	1efvb1	0.231	0.972	5.562	threading_10	LRVLVAVKRVIDYAKIRVKPDRGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGADRGIHVEVPPAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLT-SKLSVISVEDPPQRTAGVKV------ETTEDLVAKLKEIGR

Predicted Tertiary Structure


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TM-score=0.903 to 2a1uB SCOP code=c.26.2.3	TM-score=0.897 to 2a1uB SCOP code=c.26.2.3	TM-score=0.883 to 2a1uB SCOP code=c.26.2.3	TM-score=0.865 to 2a1uB SCOP code=c.26.2.3	TM-score=0.892 to 1efpB SCOP code=c.26.2.3