Template-based Modeling Results for YDHY_ECOLI

Submitted Primary Sequence

>Length 208
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHCCCCCCEECCCCCEEEECCCCHHHHHHCCCCCEEEECHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
5432322213211211200200010000000000001101133332322222223232000000123010031001001322312222211102102222123322222222211000002102203200003101020101224300000033301000000200112001023322200101100200210111002012232134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
1	MUSTER	2vpzB	0.298	0.678	2.799	threading_1	-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV----------GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCPACVETCPTYCRTFGDLEDPES
2	SPARKS	1kqfb	0.213	0.856	4.073	threading_2	------------------------------AMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCPACVKTCPTGAIHFGTKKEMLE
3	PROSPECT2	2vpwB	0.298	0.678	3.478	threading_3	M-------------------------------------------------------PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVGEYPNL----------VVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCAHCVETCPTYCRTFGDLEDPES
4	PPA-I	2vpzB	0.298	0.678	4.231	threading_4	-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREV----------GEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCPACVETCPTYCRTFGDLEDPES
5	HHPRED-l	1kqf_B	0.215	0.851	3.874	threading_5	-----------AMETQDIIKRSA-------------------TNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSARFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCPACVKTCPTGAIHFGTKKEML-
6	HHPRED-g	2ivf_B	0.294	0.736	4.560	threading_6	-------------------------------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHNNVTTYPGKGYPREDQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCNACNRQCPGRVRAFGYLDDTTS
7	SP3	1h0hb	0.219	0.726	3.588	threading_7	---------------------------------------------------------SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDATGCVLFTPKDLEDYESVISACPYDVPRKVAESNQMAKCDMCPACVTSCPTGAMNFGDLSEMEA
8	SAM-T99	2vpzB	0.298	0.678	5.353	threading_8	-------------------------------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWI----------REREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCPACVETCPTYCRTFGDLEDPES
9	MUSTER	1ti4B1	0.185	0.726	2.681	threading_9	-------------------------------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEWPGYTASMQRGHRWMNIERRERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQR-EDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCPRCAHNCGSFVYEFLKTTPEAM
10	SPARKS	1h0hb	0.219	0.726	4.009	threading_10	---------------------------------------------------------SKGFFVDTTRCTACRGCQVACKQWHGNPATPTENTGFHQNPPDFNFHTYKLEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDATGCVLFTPKDLEDYESVISACPYDVPRKVAESNQMAKCDMCPACVTSCPTGAMNFGDLSEMEA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.635 to 1ti4B SCOP code=b.3.5.1	TM-score=0.738 to 1ti4B SCOP code=b.3.5.1	TM-score=0.690 to 1kqgB SCOP code=d.58.1.5	TM-score=0.617 to 1ti4B SCOP code=b.3.5.1	TM-score=0.635 to 1ti4B SCOP code=b.3.5.1