Template-based Modeling Results for PHSC_ECOLI

Submitted Primary Sequence

>Length 261
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
554232132012201211231224111100110001000000000010001020124223322120000110000000000000000000001011110000002000100200000000000000001001320100102131003100100100000002123131222231410111100000011000000000000000121002110101100000000000000000000000011231012002010212344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
1	MUSTER	1kqfC	0.186	0.701	1.138	threading_1	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPLTQTFTPQMGRILHPFFGIAIFVALMFMFVRFVHHN------IPDKK--IPWLLNIVEVLKG--NEHKVA----DVGKYN-AGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVK---GSIKGMIEGKKHH
2	SPARKS	1kqfc	0.190	0.705	1.373	threading_2	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN------IPDKKDIPWLLN-----IVEVLKGNEHKVAD--VGKYN-AGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAF---WVKGSIKGMIEGKKHH
3	PROSPECT2	3a0oA3	0.099	0.931	1.448	threading_3	WLNSEQLSAFADAVAERPVMPEPQPYPNWRQMYIDCQEVIYAIRHLKWLLAVAAWDTKGATSRA-----------YNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSV-------LLERTREVADHVIAHARIHVFPYDSHAVRDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGLPGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEDDLVYRHDYPQVEAV
4	PPA-I	1kqfC	0.179	0.705	2.394	threading_4	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHN-----IPDKKD--IPWLLNIVEVLKG--NEHKVA----DVGKYN-AGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVK---GSIKGMIEGKKHH
5	HHPRED-l	1kqf_C	0.191	0.701	7.189	threading_5	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNI-----PDKKDI--PWLLNIVEVLKG----NEH--KVADVGKYNAGQKMMFWSIMSMIF-VLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVK---GSIKGMIEGKVS-
6	HHPRED-g	1kqf_C	0.174	0.705	7.338	threading_6	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIP-----DKKD--IPWLLNIVEVLKGNE------HKVADVGKYNAGQKMMFWS-IMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVK---GSIKGMIEGKVSR
7	SP3	1kqfc	0.190	0.705	0.483	threading_7	------------------------------------------------------------SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTPQMGRILHPFFGIAIFVALMFMFVRFVHHN------IPDKKDIPWLLN-----IVEVLKGNEHKVADVG--KYN-AGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAF---WVKGSIKGMIEGKKHH
8	SAM-T99	1kqfC	0.189	0.670	3.287	threading_8	-----------------------------------------------------------------IVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTPQMGRILHPFFGIAIFVALMFMFVRFVHHN-----IPDKKDWLLNIVEVLKG----------NEHKVADVGKYNAGQKMMFWSIMSMIF-VLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWVK---GSIKGMIEGKV--
9	MUSTER	1t33A	0.137	0.782	0.727	threading_9	MNPTTTGEQAKSQLIA---------LAQFGEY----LHAT-----TRDIAALAGQNIAA-GSKEDLYL-ACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTVNLSKFISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYT-GCDAN---------DTRMILHTHALLGEVLAFRLGKETILL--TGWPQFD-------EEKAELIYQTVTCHIDLILHGLTQ------------------
10	SPARKS	1rqia	0.152	0.858	0.859	threading_10	MDFPQQVKQANQALSRFIAPLPFQNTPVVETMQYGALLGRLRPFLVYATGHMFGVSTNTL------------------DAPAAAVECIHAYSLIHDDLPAMRGLPTCHVKFGEANAILAGDALQTLAFSILSDADM--PEVSDRDRISMISELASASGGMCGGQALDLDAEGKHV--PLDALERIHRHK--------TGALIRAAVRLGALSAGGRRALPVLDKYAESIGLAFQVQDDILDVVGD-------TATLGKRQG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.720 to 1kqfC SCOP code=f.21.1.1	TM-score=0.721 to 1kqfC SCOP code=f.21.1.1	TM-score=0.713 to 1kqfC SCOP code=f.21.1.1	TM-score=0.576 to 1j0nA SCOP code=a.102.3.2	TM-score=0.713 to 1kqfC SCOP code=f.21.1.1