Template-based Modeling Results for YDCP_ECOLI

Submitted Primary Sequence

>Length 653
MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG
CCCCCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHEEECCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG
55233331100000310200110031000000000310002121212231012001002421020000000002332031012001102401110000000000211022010000020212113102002301010000022021310210342031101000000100000110000002122222313123223111002233221122320001131110010011004010300002011221200210020022002101423222220122212320121013001220131002233221112312321110001002125320201022302311101011444222020110222343222001131222122132322002201210120023112333210102001143411010012322201111313123223233223201300340251201021010202210000011022012200210121112223222433223323223433110000021330121035120210100122333423011100210011012101421423242120100000213210102010310012002301320041222221212101221132123444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATIEFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVVKVAKDHLDVAVTEPLANGDGLNVLIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVSPDELLKTLPKRKG
1	SPARKS	1zlpa	0.134	0.364	1.101	threading_1	L-IEEHGSVLMPGVQDALSAAVVEKTGFHAAFVSGAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDALKIAAARSDFFLVARTDARAPHIRRANLYKEAGADATFVEAPANVDELKEVSAKTKGLRIANM--------------------------------------------IEGGKTPLHT---------PEEFKEMGFHLIAHTAVYATARALVNIMKILKETTRDDLDQMATFSEFNE-LISLESWYEMESKFK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1w36B1	0.094	0.796	1.341	threading_2	MSPLQGERLIEASAGTIAALYLRLLLGLGGSAAFPRPLTVEEFTEAATAELRGLRIACLRETTDNPLYERLLEEIDDKAQAAQWLLLAERQMDEAAVFTIHGFCESGMLFEQQLIEDESLLRYQACADFWRRH-------CYPLPREIAQVVFETWKGP---------------QALLRDINRYLQGEAP----------VIKAPPP----------DIRDLVITRALAEIRETVAREKRRRGELGFDDMLSRLDSALRVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNW----------------------------------------------RSAPGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLM------EGESCGVGDYQSTMAQV---------------------------CAAQIRDWLQAGQ------RGEALLMNGDDARPVRASDISVLVRSRQEAAQVRDLEIPSVYLSNRDRLESDKHLVQIV------TIHKSKGLFITNFRVQEQAFYHDRHSFEAVLDLNAAPESVDLAEAERLAEDLRAPLVRRRGDKKGDTDVHQSAQTGDN
3	HHPRED-l	3iwp_A	0.167	0.331	1.075	threading_3	-----NGFLMEVCVDSVESAVNAERGGADRIELCSGLS----EGGTSMGVLQVVKQS---VQIPVFVMIRPFLYDREIEVMKADIRLAKLYGADGLVFGAKELCAICRPPVTFHRAFDMVHDPMAALETLLTLGFERVLTSALEGLPLIKRLIEQAKGRIVVMPGGGITDEGSGAT---EFHCS--ARST---RDSGMKFRNSSAMGASLSCSEYSLKVTD--------------------------VTKVRTLNAI----AKNIL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SPARKS	1muma	0.139	0.364	1.067	threading_4	A-LTKENPLQIVGTINANHALLAQRAGYQAIYLSGGSLGLPDLGISTLDDVLTDIRRITDCSLPLLVDADI-GFGSSAFNVARTVKSMIKAGAAGLHIEDVDRIRAAVPDFVIMARTDALAVEIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQVPILANI-----------------------TEFGATPLFT------------------------------TDELRSAHVAMALYPAFRAMNRAAEHVYNVLRQTQKSVIDTMQTRNELYESINYYQYEEKLDNLFA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PROSPECT2	1f0ia	0.088	0.681	1.323	threading_5	-----------AATPHLDAVEQTLRSAADLLQTPGCWGDDKCADRVGTKRLLAKTENIGNATRTVDISTLAPFPNGAFDAIVAGLKESAAKGNSLKVRI---------------LVGAAPHMNGIPSKYRDKL------------TAKLGKAAENITLNVFSWNHSKILVVDGQSALT----GGINSWKDDYLDTTHPVSDV-----------------------------------DLALTG-----PAAGSAGRYLDTLWTWTCKNKS----------------------NIASVWFAASGNAGCMPTMHKDTNPK-------------------ASPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEESALRA-----------------------LVASAKGHIEISQQDLNATCPPLPRYDIRLYDALAAKMAAGVKVRIVVSDPANRGYSQIKSLSEISDTLRNRLANIT------------------------------GGQQAAKTAMCSNLQLAT------------------------FRSSPNGKWADGHPYAQHHKLVSVDSSTFGYIVESPEAAKQLDAKLLDPQWKYSQETATVD--------YARGICGA
6	PROSPECT2	1xpqA	0.087	0.686	1.313	threading_6	----PAKKKVIIIGAGIAGLKAASQNGIQLVLEARDRVGGRLQTVTGYQG------------RKYDIGASWHHDTLTNPLFLEEAQLSLNDGRTRFVFDD---------DNFIYIDE----------------ERGRVDHDKELLLEIVDNEMSK----------------------FAELEFHQHLGVS------------------------------DCSFFQLVMKYL---------------LQRRQFLTNDQIRYLPQLCR---------------YLELWHGLDWKLLSAKDTYFGHQGRNAFALNYDSAQSFPQNWLKLSCEVKSITREP----SKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNL----RGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS-------NESSKIVTLANSTNEFVERNAENLDELDSMLERTSVTCWSQPLFFVNTGVASFMPLTNKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIFPVDMVVAMSNGQDSRIEHTIMDGAGCAYGAWESGRREAT------------------------------------------RISDLLK-------------------------LEHHH
7	PROSPECT2	1foha	0.092	0.796	1.276	threading_7	TKYSESYCDVLIVGAGPAGLMAAR----------------------------VLSEYVRQKP-----------------------------DLKVRII---------DKRSTKVYNGQADGLQCRTLESLKNLGL----------ADKILSEANDMS-TIALYNPDE-------------------------NGHIRRTDRIPDTLPGISRYHQVVLHQGRIERHDSIAEISDTRIKVIPEKMEIDSSKAAYPVTMTLRYMSDHESTPLQFGHKTENSLFHSNLQTQEEEDANYRLPEGKEAGECDGGHSWVRRTLGFEMIGEQTDYIWGVLDAVPASNFPDIRSRCAIHSAESGSIMI--IPRENNLVRFYVQLQFT------------PEVVIANAKKIF------HPYTFDVQQLDWFTAYHIGQRVTEKFSKDHTHSPKAGLVLTGRAKRDILKHQFSRLFSGR-----PAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQELAKNCVVVFAGKATDATQMSRIKKDSENSVISLYTPKVSDRNSRIDVIDDIEMHDFPAPALHPKWQYDFIYADCDSWHHPHPKSYQAWGVDETDLEGTAEIDRYFSGIVEPKEKSGAQTE------ADWTKS
8	PROSPECT2	1w1oA	0.097	0.660	1.264	threading_8	ALALDGK--LRTDS------NATAAASTD----FGNITSALPAYPSSTGDLVALLSAANSTPGWPIAFRGRGHSLMGQ------------AFAPGGVVVNMASLGDAAAPPRINVSADGR----------------YVDAGGEQVWIDVLRASLARG---VAPRSWT----DYLYLTVGGTLSNAGISGQAFRHGNVLEMDVITGHGEMV----TCSKQLN----ADLFDAVLGGLGRARIAVEPAPARARWVRFAAFSADQERLTA--------------------------------------------PRSFGPMSYVEGSVFVNQSLATDLANTGFFT-------------------------------------------------DADVARIVALAGERNATTVYSIEATLN-------------------------------YAAVDQELASVLGTLSYVEGFAFQRDVAY-------AAFLDRVHGEEVALNK------------------LGLWRVPHPWLNMFVPRSRIADFDRG--------VFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFY----------AVSLLFSSNDLAQEQNRRILRFCDLAGIQYKTARHTDRSDWVRHFGAAKN
9	MUSTER	2zjaA	0.126	0.926	0.807	threading_9	MRVDELRVSTLKERG-AEALKSGILEGKNALIS------IPTASGKTLIAEIAMVHRILTQGGKAVYIV----LKALAEEKFQEFQDWEKIGLRAMATGDYDSKDEWLGKYDIIIAT------AEKFDSLLRHGSSWI---KDVKIDEIHLIGSR--ATLEVIL-KAQIIGLSAPEELAEWLNAVSDWR-----PVKLRRGVFYQGFVTWEDGSIDRFSS---WEELVYDAIRKKKGALIFVNMRRKALELSKKVKPEIRALNELADSLEENPTNEKAGLGRDERVLVEENFRKGIIKAVVATPT-LSAGINTPAFRVIIRDIWRYSDFGMERIPIIEYDEVGEGIIVSTSDDPREV-MNHYIFGKPEKLFSQLSNESNLRSQVLALIATFYSTVEEILKFISNTFYAYQRKDTYSLEEKIRNILFIEISLEDKIRPLSLGIRTAKLYIDPYTAKMFKDKMEEVVKDPNPIGIFHL-LTPDI----TPFN-YSKREFERLEEEYYEFKDRLYFDDPYISGYDPYLERKFFRAFKTALVLLAWINEVPEGEIVEKYSVEPGDIYRIVETAEWLVYSLKEIA--KVLGAYEIVDY--ETLRV-----RVKYGIREIPMQLPLVGRRRARALYNSGSIISQARPEELLKIEGIGVK
10	SPARKS	1xi3a	0.194	0.285	0.961	threading_10	LR-NKLKLYVITDRRLVESVREALEGGATAIQMRIKN----APTREMYEIGKTLRQLTREYDALFFVD-------DRVDVALA-------VDADGVQLGPIEVAKEIAPNLIIGASV----YSLEEALEAEKKGADYLGAARVIGLEGLRKIVES--VKIPVVAIGGI-------------------------------------------------------NKDNAREVLKTGVDGIAISAVMGAED-VRKATEELRKIVEEVLG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.516 to 1oqfA SCOP code=c.1.12.7	TM-score=0.568 to 1w36E SCOP code=c.37.1.19	TM-score=0.536 to 1x7iB SCOP code=c.1.30.1	TM-score=0.526 to 1oqfA SCOP code=c.1.12.7	TM-score=0.501 to 1q32B SCOP code=d.136.1.3