Template-based Modeling Results for YDCN_ECOLI

Submitted Primary Sequence

>Length 178
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEEEECCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
4431132011002201443311022003113013000020234321110100120020030101100223322221012233220001000123342101000010222222322113331110000020101010322202022110010103110002011422010000011366
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNESSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHFSIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYRNGGEQTVHFHSLIHYPRS
1	MUSTER	1y9qA	0.405	0.972	4.029	threading_1	TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAY-PR-
2	SPARKS	1y9qa	0.410	0.972	3.566	threading_2	TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEG-IKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
3	PROSPECT2	1zz6A	0.153	0.955	3.502	threading_3	--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPAGNDLDDGVIIQMVYYVYNCLVRTKRAPSLVPLVVDVLTDN--PDDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----
4	PPA-I	1y9qA	0.410	0.972	5.244	threading_4	TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNKIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
5	HHPRED-l	1y9q_A	0.421	0.961	3.109	threading_5	-TDFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSRSFPDDLN-KIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQN-IVAYPR-
6	HHPRED-g	1y9q_A	0.415	0.961	3.146	threading_6	-TDVKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSERSFPDDLN-KIHTLFPYAADTGLEIFEITLLDHHQQ-SSPHALGVIEYIHVLEGI-KVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEK-AVFQNIVAYPR-
7	SP3	1zz6a	0.147	0.955	3.265	threading_7	--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPNDLDDGVIIQMPDEYYVYNCLVRTKRAPSLVPLVVDVLTDNP--DDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----
8	SAM-T99	1y9qA	0.407	0.938	4.230	threading_8	TDVFKSQIANQLKNLRKSRGLSLDATAQLTGVSKA-LGQIERGESSPTIATLWKIASGLEASFSAFF-----NDPQLLSSERDLNKIHTLFPYAADTGLEIFEITLLDHH-QQSSPHALGVIEYIHVLEG-IKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAYP---
9	MUSTER	2bnnA	0.150	0.972	3.204	threading_9	-KTASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGGLTLTQLGRIAHVLGTSIGALTPPAGNDLVIIQMPDERPYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNGHAGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAKGTGSAKLIAVNF----
10	SPARKS	1zz6a	0.153	0.955	3.479	threading_10	--TASTGFAELLKDRREQVKMDHAALASLLGETPETVAAWENGEGELTLTQLGRIAHVLGTSIGALTPPAGNDGVIIQMPDEVYYVYNCLVRTKRAPSLVPLVVDVLTDN--PDDAKFNSGNEFLFVLEGEIHMKWGDKEALLPTGASMFVEEHVPHAFTAAGTGSAKLIAVNF----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.981 to 1y9qA SCOP code=a.35.1.8	TM-score=0.980 to 1y9qA SCOP code=a.35.1.8	TM-score=0.981 to 1y9qA SCOP code=a.35.1.8	TM-score=0.643 to 2bnnA SCOP code=a.35.1.3	TM-score=0.981 to 1y9qA SCOP code=a.35.1.8