Template-based Modeling Results for YCIO_ECOLI


  Submitted Primary Sequence

>Length 206
MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
CCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
42100101341223500220030044110000001000000010313300220030241232210000010021013002023201200231010000000212430133102332210001012130011003202100000012122232141113101330352000001112124330100002332010012121213212
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
1MUSTER1k7jA0.9050.9663.970threading_1-SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNA-ERICRIRQLPDGHNFTL-CRDLSELSTYSFVDNVAFRLK-NNTPGNYTFILKGTKEVPRR-LLQEKRKTIGRVPSNPIAQALLEALGEPLST-SLLPGSEF-TESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
2SPARKS3ajea0.2810.9855.393threading_2-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKIPDKVLEIAQIVWPGPLTFVLKKTERVP-KEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRP-SPTKAEDVIVDLNGRVDVIIDGGHTFGVESTIINVTVEPPVLLRPGPFTIEELK
3PROSPECT22eqaA10.2840.9764.461threading_3-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKIPDKVLEIAQIVWPGPLTFVLKKTERVPKEVT-AGLDTVAVR-PAHPIALQLIRESGVPIAAPSANLATRP-SPTKAEDVIVDLNGRVDVIIDGGHTFGVESTIINVTVE-PVLLRPGPFTIEELI
4PPA-I2eqaA10.2840.9768.310threading_4-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVADIPDKVLEIAQIVWPGPLTFVLKKTERVPKEV-TAGLDTVAVR-PAHPIALQLIRESGVPIAAPSANLATRP-SPTKAEDVIVDLNGRVDVIIDGGHTFGVESTIINVTVE-PVLLRPGPFTIEELK
5HHPRED-l1k7j_A1.0000.9616.470threading_5-SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNA-ERICRIRQLPDGHNFTL-CRDLSELSTYSFVDNVAFRL-KNNTPGNYTFILKGTKEVPRRLLQEKRKTIG-RVPSNPIAQALLEALGEP-LSTSL-LPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPF-
6HHPRED-g1k7j_A1.0000.9665.430threading_6-SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNA-ERICRIRQLPDGHNFTL-CRDLSELSTYSFVDNVAFRL-KNNTPGNYTFILKGTKEVPRRLLQEKRKTIG-RVPSNPIAQALLEALGEP-LSTSL-LPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
7SP31k7ja0.9100.9665.112threading_7-SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNAE-RICRIRQLPDGHNFTLC-RDLSELSTYSFVDNVAFRL-KNNTPGNYTFILKGTKEVP-RRLLQEKRKTIGRVPSNPIAQALLEALGEP-LSTSLLPGSEF-TESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL
8SAM-T992eqaA10.2840.9765.535threading_8-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKIPDKVLEIAQIVWPGPLTFVLKKTERVPKEV-TAGLDTVAVR-PAHPIALQLIRESGVPIAAPSANLATRPSP-TKAEDVIVDLNGRVDVIIDGGHTFGVESTIINVTVE-PVLLRPGPFTIEELK
9MUSTER2eqaA10.2840.9763.825threading_9-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKIPDKVLEIAQIVWPGPLTFVLKKTERVPKE-VTAGLDTVAVR-PAHPIALQLIRESGVPIAAPSANLATRP-SPTKAEDVIVDLNGRVDVIIDGGHTFGVESTIINVTVE-PVLLRPGPFTIEELK
10SPARKS1k7ja0.9200.9665.134threading_10-SQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKIEDKNA-ERICRIRQLPDGHNFTLC-RDLSELSTYSFVDNVAFRL-KNNTPGNYTFILKGTKEVPRRL-LQEKRKTIGRVPSNPIAQALLEALGEP-LSTSLLPGSEF-TESDPEEIKDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.977 to 1k7jA
TM-score=0.994 to native
SCOP code=d.115.1.1		 TM-score=0.871 to 1k7jA
TM-score=0.885 to native
SCOP code=d.115.1.1		 TM-score=0.873 to 1k7jA
TM-score=0.887 to native
SCOP code=d.115.1.1		 TM-score=0.869 to 1k7jA
TM-score=0.882 to native
SCOP code=d.115.1.1		 TM-score=0.865 to 1k7jA
TM-score=0.879 to native
SCOP code=d.115.1.1

  Experimental Structure

Download 1k7jA
SCOP code=d.115.1.1