Template-based Modeling Results for YCIE_ECOLI

Submitted Primary Sequence

>Length 168
MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK
442221012102101101220120032002313313301210241132134102202200341322332022002300210220122232330020000000010000000100010033022320030022003212301220230023002200222323224244
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNRIEHYHDWLRDAHAMEKQAESMLESMASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDSMSKMAALGQSIGGIFPSDEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKQMADWLIQNIPQTTEKFLIRSETDGVEAKK
1	MUSTER	2gs4A	0.188	0.917	2.260	threading_1	KTIEDVFIHLLSDTYSAEKQLTRALAKLARA-TSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRKCVAEGLIEEANEVIESTEKVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKK-------------
2	SPARKS	2gyqa	0.212	0.899	5.063	threading_2	QTMEDLLLHGLRDIYYAEQQITKALPKMIEQA-TNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNPAIDGLIKEADETAGEIADVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRAS----------------
3	PROSPECT2	2gs4A	0.208	0.917	2.147	threading_3	KTIEDVFIHLLSDTYSAEKQLTRALAKLA-RATSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRKCVAEGLIEEANEVIESTEKNEVRDAALAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVN-------------KK
4	PPA-I	2gs4A	0.188	0.917	3.101	threading_4	KTIEDVFIHLLSDTYSAEKQLTRALAKLARA-TSNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRKCVAEGLIEEANEVIESTEKVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKK-------------
5	HHPRED-l	3ogh_B	0.986	0.821	6.164	threading_5	-NRIEHYHDWLRDAHA-EKQAES-LES-ASRIDNYPELRARIEQHLSETKNQIVQLETILDRNDISRSVIKDS-----------------DEIVKGSISGYVFEQFEIACYTSLLAAAKNAGDTASIPTIEAILNEEKH-ADWLIQHIPQTTEKFLIRSE--------
6	HHPRED-g	2gs4_A	0.197	0.905	5.106	threading_6	KTIEDVFIHLLSDTYSAEKQLTRALAKLA-RATSNEKLSQAFHAHLEETHGQIERIDQVVESESNKIKR-CVA-EGLIEEANEVIESTEKNEVRDAALAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKK-------------
7	SP3	2gyqa	0.212	0.899	4.916	threading_7	ITMEDLLLHGLRDIYYAEQQITKALPKMIEQAT-NRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVCPAIDGLIKEADETAGEIADVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRAS----------------
8	SAM-T99	2gyqA	0.227	0.893	5.618	threading_8	QTMEDLLLHGLRDIYYAEQQITKALPKMIEQATN-RDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIGLIKEADETAGEIADKTVLDAAIVAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTVALRA-----------------
9	MUSTER	2gyqA	0.221	0.887	2.127	threading_9	ITMEDLLLHGLRDIYYAEQQITKALPKMIEQA-TNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVCPAIDGLIKEADETAGEIADVLDAAIVANAQAVEHYEIARYGTLIAWAEELGHDDIVRFLTTNLNEEKAANTKLNTV------------------ALR
10	SPARKS	2gs4a	0.188	0.917	4.892	threading_10	KTIEDVFIHLLSDTYSAEKQLTRALAKLARAT-SNEKLSQAFHAHLEETHGQIERIDQVVESESNLKIKRKCVAEGLIEEANEVIESTEKVRDAALIAAAQKVEHYEIASYGTLATLAEQLGYRKAAKLLKETLEEEKATDIKLTDLAINNVNKK-------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.940 to 2gs4A SCOP code=a.25.1.4	TM-score=0.938 to 2gs4A SCOP code=a.25.1.4	TM-score=0.892 to 2gyqA SCOP code=a.25.1.4	TM-score=0.938 to 2gs4A SCOP code=a.25.1.4	TM-score=0.940 to 2gs4A SCOP code=a.25.1.4